RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ACOT13Q9NPJ3 140 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 TMEM106BQ9NUM4 274 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 MTORP42345 2549 aa13.97□□□□□ -0.17
CXCL1-201ENST00000395761 LOC100289279A0A1B0GTE1 492 aa13.96□□□□□ -0.17
CXCL1-201ENST00000395761 A0A1B0GTI1 187 aa13.96□□□□□ -0.17
CXCL1-201ENST00000395761 CLDN25C9JDP6 229 aa13.96□□□□□ -0.17
CXCL1-201ENST00000395761 P2RY10O00398 339 aa13.96□□□□□ -0.17
CXCL1-201ENST00000395761 RPSAP08865 295 aaKnown RBP13.96□□□□□ -0.17
CXCL1-201ENST00000395761 KIR3DL2P43630 455 aa13.96□□□□□ -0.17
CXCL1-201ENST00000395761 BDH1Q02338 343 aa13.96□□□□□ -0.17
CXCL1-201ENST00000395761 SPHARQ15513 63 aa13.96□□□□□ -0.17
CXCL1-201ENST00000395761 MPPED2Q15777 294 aa13.96□□□□□ -0.17
CXCL1-201ENST00000395761 WDR38Q5JTN6 314 aa13.96□□□□□ -0.17
CXCL1-201ENST00000395761 GATAD2BQ8WXI9 593 aa13.96□□□□□ -0.17
CXCL1-201ENST00000395761 PIGCQ92535 297 aa13.96□□□□□ -0.17
CXCL1-201ENST00000395761 FCGR1BQ92637 280 aa13.96□□□□□ -0.17
CXCL1-201ENST00000395761 PAPOLGQ9BWT3 736 aaKnown RBP13.96□□□□□ -0.17
CXCL1-201ENST00000395761 MOB1AQ9H8S9 216 aa13.96□□□□□ -0.17
CXCL1-201ENST00000395761 UFSP2Q9NUQ7 469 aa13.96□□□□□ -0.17
CXCL1-201ENST00000395761 WIPI2Q9Y4P8 454 aa13.96□□□□□ -0.17
CXCL1-201ENST00000395761 CSPG4Q6UVK1 2322 aa13.96□□□□□ -0.18
CXCL1-201ENST00000395761 ZNF850A8MQ14 1090 aa13.95□□□□□ -0.18
CXCL1-201ENST00000395761 H3BSH0 61 aa13.95□□□□□ -0.18
CXCL1-201ENST00000395761 CST4P01036 141 aa13.95□□□□□ -0.18
CXCL1-201ENST00000395761 SMIM18P0DKX4 95 aa13.95□□□□□ -0.18
CXCL1-201ENST00000395761 GATA4P43694 442 aa13.95□□□□□ -0.18
CXCL1-201ENST00000395761 MAP2K4P45985 399 aa13.95□□□□□ -0.18
CXCL1-201ENST00000395761 MAP2K3P46734 347 aa13.95□□□□□ -0.18
CXCL1-201ENST00000395761 TGM4P49221 684 aa13.95□□□□□ -0.18
CXCL1-201ENST00000395761 GBX2P52951 348 aaPredicted RBP13.95□□□□□ -0.18
CXCL1-201ENST00000395761 NANOS3P60323 173 aaKnown RBP13.95□□□□□ -0.18
CXCL1-201ENST00000395761 CCDC58Q4VC31 144 aa13.95□□□□□ -0.18
CXCL1-201ENST00000395761 UBE2UQ5VVX9 321 aa13.95□□□□□ -0.18
CXCL1-201ENST00000395761 KLBQ86Z14 1044 aa13.95□□□□□ -0.18
CXCL1-201ENST00000395761 RDH10Q8IZV5 341 aa13.95□□□□□ -0.18
CXCL1-201ENST00000395761 CELF2-AS1Q8N7Q2 184 aa13.95□□□□□ -0.18
CXCL1-201ENST00000395761 PLPP7Q8NBV4 271 aa13.95□□□□□ -0.18
CXCL1-201ENST00000395761 CLDND2Q8NHS1 167 aa13.95□□□□□ -0.18
CXCL1-201ENST00000395761 OR5M11Q96RB7 305 aa13.95□□□□□ -0.18
CXCL1-201ENST00000395761 FGF23Q9GZV9 251 aaPredicted RBP13.95□□□□□ -0.18
CXCL1-201ENST00000395761 NOP16Q9Y3C1 178 aaKnown RBP13.95□□□□□ -0.18
CXCL1-201ENST00000395761 DYSFO75923 2080 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 TMEM178BH3BS89 294 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 OGG1O15527 345 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 PTBP3O95758 552 aaKnown RBP13.94□□□□□ -0.18
CXCL1-201ENST00000395761 CYB5R3P00387 301 aaPredicted RBP13.94□□□□□ -0.18
CXCL1-201ENST00000395761 HEXAP06865 529 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 GRPP07492 148 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 IGHV4-31P0DP07 118 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 JUNBP17275 347 aaPredicted RBP13.94□□□□□ -0.18
CXCL1-201ENST00000395761 GNALP38405 381 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 CCR9P51686 369 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 TAS2R43P59537 309 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 SLC3A1Q07837 685 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 RIPPLY1Q0D2K3 151 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 PRDX4Q13162 271 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 DMRTC1Q5HYR2 192 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 XAF1Q6GPH4 301 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 KCTD8Q6ZWB6 473 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 ZNF367Q7RTV3 350 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 WDR86Q86TI4 376 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 SPERTQ8NA61 448 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 SEMA6DQ8NFY4 1073 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 OR2G2Q8NGZ5 317 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 OR8S1Q8NH09 359 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 RAB1CQ92928 201 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 TIMD4Q96H15 378 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 MRPS26Q9BYN8 205 aaKnown RBP13.94□□□□□ -0.18
CXCL1-201ENST00000395761 FRRS1LQ9P0K9 344 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 PIGLQ9Y2B2 252 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 NPTNQ9Y639 398 aa13.94□□□□□ -0.18
CXCL1-201ENST00000395761 TANC2Q9HCD6 1990 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.93□□□□□ -0.18
CXCL1-201ENST00000395761 ZNF816-ZNF321PA0A0X1KG74 233 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 A6NIN4 97 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 E9PI62 339 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 DHRS3O75911 302 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 ZNF205O95201 554 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 CD1AP06126 327 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 ATP6V1B1P15313 513 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 FAHP16930 419 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 CCL1P22362 96 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 LMO4P61968 165 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 HOXA4Q00056 320 aaPredicted RBP13.93□□□□□ -0.18
CXCL1-201ENST00000395761 GPR50Q13585 617 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 FAM201AQ5SY85 155 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 RPL22L1Q6P5R6 122 aaKnown RBP13.93□□□□□ -0.18
CXCL1-201ENST00000395761 KRT74Q7RTS7 529 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 OR14K1Q8NGZ2 314 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 Q8TCH9 128 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 RPS4Y2Q8TD47 263 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 OR5P3Q8WZ94 311 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 ITPKCQ96DU7 683 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 TRIM36Q9NQ86 728 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 MPC1Q9Y5U8 109 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 V9GYS6 101 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 TLN2Q9Y4G6 2542 aa13.93□□□□□ -0.18
CXCL1-201ENST00000395761 ISPDA4D126 451 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 CD5LO43866 347 aa13.92□□□□□ -0.18
CXCL1-201ENST00000395761 LMX1BO60663 402 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms