RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 C9orf40Q8IXQ3 194 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 ZNF565Q8N9K5 539 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 DMBX1Q8NFW5 382 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 MRPL24Q96A35 216 aaKnown RBP12.66□□□□□ -0.38
CLIP2-203ENST00000395060 MRPL38Q96DV4 380 aaKnown RBP12.66□□□□□ -0.38
CLIP2-203ENST00000395060 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 GPR37O15354 613 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 TNFSF12O43508 249 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 SRSF10O75494 262 aaKnown RBP12.65□□□□□ -0.38
CLIP2-203ENST00000395060 TAS2R31P59538 309 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 QRFPP83859 136 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 NAAAQ02083 359 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 SKA3Q8IX90 412 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 SGK3Q96BR1 496 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 RHOVQ96L33 236 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 ASH2LQ9UBL3 628 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 B3GALT1Q9Y5Z6 326 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 PMS2P1A4D2B8 440 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 A8MVM7 634 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 CDC14BO60729 498 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 NXPH3O95157 252 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 SMIM6P0DI80 62 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 AKT2P31751 481 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 OPRM1P35372 400 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 PTGER4P35408 488 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 RRADP55042 308 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 TOMM20Q15388 145 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 CHRFAM7AQ494W8 412 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 NUP54Q7Z3B4 507 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 C20orf196Q8IYI0 205 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 OR9K2Q8NGE7 335 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 DYRK2Q92630 601 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 PFDN5Q99471 154 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 GABRG3Q99928 467 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLIP2-203ENST00000395060 ZNF581Q9P0T4 197 aa12.65□□□□□ -0.38
CLIP2-203ENST00000395060 PCDH15Q96QU1 1955 aa12.65□□□□□ -0.39
CLIP2-203ENST00000395060 FRYQ5TBA9 3013 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 THEGLP0DJG4 465 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 RAB5AP20339 215 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 DVL1P1P54792 670 aaPredicted RBP12.64□□□□□ -0.39
CLIP2-203ENST00000395060 PDCD1Q15116 288 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 GUK1Q16774 197 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 AADACL3Q5VUY0 350 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 BTNL8Q6UX41 500 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 C6orf201Q7Z4U5 140 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 GKN2Q86XP6 184 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 OR10S1Q8NGN2 331 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 RAB18Q9NP72 206 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 FAM206AQ9NX38 181 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 CYP8B1Q9UNU6 501 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 MS4A18H0YCH9 400 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 BPNT1O95861 308 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 CD5P06127 495 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 MYF5P13349 255 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 OMGP23515 440 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 LAP3P28838 519 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 SLC6A9P48067 706 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 POLR2HP52434 150 aaKnown RBP12.64□□□□□ -0.39
CLIP2-203ENST00000395060 MS4A18Q3C1V0 323 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 ARHGEF39Q8N4T4 335 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 POC1AQ8NBT0 407 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 PIGTQ969N2 578 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 AQP10Q96PS8 301 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 RARRES2Q99969 163 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 FAM86C1Q9NVL1 165 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 TRBV6-7A0A0A0MS04 114 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 H7C1Q1 480 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 DXOO77932 396 aaKnown RBP12.64□□□□□ -0.39
CLIP2-203ENST00000395060 SULT1A1P50225 295 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 NDUFA6P56556 154 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 HSD17B7P56937 341 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 PHLDA2Q53GA4 152 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 ZNF561Q8N587 486 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 C15orf54Q8N8G6 183 aa12.64□□□□□ -0.39
CLIP2-203ENST00000395060 DAZLQ92904 295 aaKnown RBP12.64□□□□□ -0.39
CLIP2-203ENST00000395060 ZNF2Q9BSG1 426 aaPredicted RBP12.64□□□□□ -0.39
CLIP2-203ENST00000395060 LOC390937A0A1W2PQ73 354 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 STMND1H3BQB6 276 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 MFNGO00587 321 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 HEXAP06865 529 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 HOXB1P14653 301 aaPredicted RBP12.63□□□□□ -0.39
CLIP2-203ENST00000395060 ZNF121P58317 390 aaPredicted RBP12.63□□□□□ -0.39
CLIP2-203ENST00000395060 EIF5AL1Q6IS14 154 aaKnown RBP12.63□□□□□ -0.39
CLIP2-203ENST00000395060 ZNF343Q6P1L6 599 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 FAHD2BQ6P2I3 314 aaPredicted RBP12.63□□□□□ -0.39
CLIP2-203ENST00000395060 CPEB2Q7Z5Q1 589 aaKnown RBP12.63□□□□□ -0.39
CLIP2-203ENST00000395060 LYPD6Q86Y78 171 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 ZNF283Q8N7M2 679 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 SUMF1Q8NBK3 374 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 FNDC9Q8TBE3 224 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 FAM213BQ8TBF2 198 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 FAHD2AQ96GK7 314 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 A0A1W2PNR3 127 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 UBE2CO00762 179 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 MT-ND4LP03901 98 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 S100A8P05109 93 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 FBP1P09467 338 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 KLK2P20151 261 aa12.63□□□□□ -0.39
CLIP2-203ENST00000395060 CFPP27918 469 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms