RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 IGHV2-70P01814 119 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 PIPP12273 146 aaPredicted RBP16.76■□□□□ 0.27
SNCA-203ENST00000394986 MYL12AP19105 171 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 HSPA13P48723 471 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 GTF2A1P52655 376 aaPredicted RBP16.76■□□□□ 0.27
SNCA-203ENST00000394986 CSNK2BP67870 215 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 ALKBH1Q13686 389 aaKnown RBP16.76■□□□□ 0.27
SNCA-203ENST00000394986 XAF1Q6GPH4 301 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 C19orf18Q8NEA5 215 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 OR10AC1Q8NH08 325 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 MICU1Q9BPX6 476 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 FN3KRPQ9HA64 309 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 C14orf119Q9NWQ9 140 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 C1orf123Q9NWV4 160 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 CNOT2Q9NZN8 540 aaKnown RBP16.76■□□□□ 0.27
SNCA-203ENST00000394986 ENPP5Q9UJA9 477 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 PCDHGB5Q9Y5G0 923 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 TANC2Q9HCD6 1990 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 RRP9O43818 475 aaKnown RBP16.75■□□□□ 0.27
SNCA-203ENST00000394986 UBCP0CG48 685 aaKnown RBP16.75■□□□□ 0.27
SNCA-203ENST00000394986 ZNF16P17020 682 aaPredicted RBP16.75■□□□□ 0.27
SNCA-203ENST00000394986 C21orf33P30042 268 aaPredicted RBP16.75■□□□□ 0.27
SNCA-203ENST00000394986 ZNF154Q13106 437 aa16.75■□□□□ 0.27
SNCA-203ENST00000394986 ZMYND11Q15326 602 aa16.75■□□□□ 0.27
SNCA-203ENST00000394986 Q6ZSR3 168 aa16.75■□□□□ 0.27
SNCA-203ENST00000394986 MOB3CQ70IA8 216 aa16.75■□□□□ 0.27
SNCA-203ENST00000394986 PEG10Q86TG7 708 aaKnown RBP16.75■□□□□ 0.27
SNCA-203ENST00000394986 KLHL36Q8N4N3 616 aa16.75■□□□□ 0.27
SNCA-203ENST00000394986 OR1M1Q8NGA1 313 aa16.75■□□□□ 0.27
SNCA-203ENST00000394986 Q8TCH9 128 aa16.75■□□□□ 0.27
SNCA-203ENST00000394986 SGCDQ92629 289 aa16.75■□□□□ 0.27
SNCA-203ENST00000394986 CNBD2Q96M20 576 aa16.75■□□□□ 0.27
SNCA-203ENST00000394986 GAL3ST1Q99999 423 aa16.75■□□□□ 0.27
SNCA-203ENST00000394986 RTL8AQ9BWD3 113 aa16.75■□□□□ 0.27
SNCA-203ENST00000394986 GPR173Q9NS66 373 aa16.75■□□□□ 0.27
SNCA-203ENST00000394986 FKBP14Q9NWM8 211 aa16.75■□□□□ 0.27
SNCA-203ENST00000394986 CAB39Q9Y376 341 aaPredicted RBP16.75■□□□□ 0.27
SNCA-203ENST00000394986 OR4C45A6NMZ5 311 aa16.74■□□□□ 0.27
SNCA-203ENST00000394986 HEXAP06865 529 aa16.74■□□□□ 0.27
SNCA-203ENST00000394986 CCR9P51686 369 aa16.74■□□□□ 0.27
SNCA-203ENST00000394986 BTG1P62324 171 aa16.74■□□□□ 0.27
SNCA-203ENST00000394986 PLCXD3Q63HM9 321 aa16.74■□□□□ 0.27
SNCA-203ENST00000394986 KCTD8Q6ZWB6 473 aa16.74■□□□□ 0.27
SNCA-203ENST00000394986 KRT74Q7RTS7 529 aa16.74■□□□□ 0.27
SNCA-203ENST00000394986 C11orf53Q8IXP5 236 aa16.74■□□□□ 0.27
SNCA-203ENST00000394986 STX19Q8N4C7 294 aa16.74■□□□□ 0.27
SNCA-203ENST00000394986 BOLLQ8N9W6 283 aaKnown RBP16.74■□□□□ 0.27
SNCA-203ENST00000394986 OR11L1Q8NGX0 322 aa16.74■□□□□ 0.27
SNCA-203ENST00000394986 ERGIC1Q969X5 290 aa16.74■□□□□ 0.27
SNCA-203ENST00000394986 RNF170Q96K19 258 aa16.74■□□□□ 0.27
SNCA-203ENST00000394986 MYCBPQ99417 103 aaPredicted RBP16.74■□□□□ 0.27
SNCA-203ENST00000394986 METTL17Q9H7H0 456 aaPredicted RBP16.74■□□□□ 0.27
SNCA-203ENST00000394986 PAK1IP1Q9NWT1 392 aaPredicted RBP16.74■□□□□ 0.27
SNCA-203ENST00000394986 UBAP1Q9NZ09 502 aa16.74■□□□□ 0.27
SNCA-203ENST00000394986 TLN2Q9Y4G6 2542 aa16.74■□□□□ 0.27
SNCA-203ENST00000394986 hCG_1807616A0A1W2PRN6 198 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 LRRC30A6NM36 301 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 IFNL4K9M1U5 179 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 LALBAP00709 142 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 IRF2P14316 349 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 GPM6AP51674 278 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 GBX2P52951 348 aaPredicted RBP16.73■□□□□ 0.27
SNCA-203ENST00000394986 LMO4P61968 165 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 MZT1Q08AG7 82 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 ZNF181Q2M3W8 571 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 ZBTB37Q5TC79 503 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 TMEM244Q5VVB8 128 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 TMPRSS11AQ6ZMR5 421 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 ZNF676Q8N7Q3 588 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 OR51A4Q8NGJ6 313 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 GATAD2BQ8WXI9 593 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 RPL3LQ92901 407 aaKnown RBP16.73■□□□□ 0.27
SNCA-203ENST00000394986 MSI2Q96DH6 328 aaKnown RBP16.73■□□□□ 0.27
SNCA-203ENST00000394986 HIST1H2AAQ96QV6 131 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 PLEKHA1Q9HB21 404 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 ABCB9Q9NP78 766 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 CHCHD3Q9NX63 227 aaKnown RBP16.73■□□□□ 0.27
SNCA-203ENST00000394986 RNF7Q9UBF6 113 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 DYSFO75923 2080 aa16.73■□□□□ 0.27
SNCA-203ENST00000394986 FAM157AC9JC47 383 aa16.72■□□□□ 0.27
SNCA-203ENST00000394986 PTGES3LE9PB15 166 aa16.72■□□□□ 0.27
SNCA-203ENST00000394986 C3orf80F5H4A9 247 aa16.72■□□□□ 0.27
SNCA-203ENST00000394986 CD5LO43866 347 aa16.72■□□□□ 0.27
SNCA-203ENST00000394986 NRASP01111 189 aa16.72■□□□□ 0.27
SNCA-203ENST00000394986 CD80P33681 288 aa16.72■□□□□ 0.27
SNCA-203ENST00000394986 DOC2BQ14184 412 aa16.72■□□□□ 0.27
SNCA-203ENST00000394986 CEACAM21Q3KPI0 293 aa16.72■□□□□ 0.27
SNCA-203ENST00000394986 CLVS2Q5SYC1 327 aa16.72■□□□□ 0.27
SNCA-203ENST00000394986 TMEM42Q69YG0 159 aa16.72■□□□□ 0.27
SNCA-203ENST00000394986 HPS1Q92902 700 aa16.72■□□□□ 0.27
SNCA-203ENST00000394986 PDCD1LG2Q9BQ51 273 aa16.72■□□□□ 0.27
SNCA-203ENST00000394986 ZNF665Q9H7R5 613 aa16.72■□□□□ 0.27
SNCA-203ENST00000394986 RAB26Q9ULW5 256 aa16.72■□□□□ 0.27
SNCA-203ENST00000394986 SIRT4Q9Y6E7 314 aaPredicted RBP16.72■□□□□ 0.27
SNCA-203ENST00000394986 DHRS7CA6NNS2 312 aa16.71■□□□□ 0.27
SNCA-203ENST00000394986 ZNF732B4DXR9 585 aa16.71■□□□□ 0.27
SNCA-203ENST00000394986 CDIPTO14735 213 aa16.71■□□□□ 0.27
SNCA-203ENST00000394986 ZFPL1O95159 310 aa16.71■□□□□ 0.27
SNCA-203ENST00000394986 ISG15P05161 165 aa16.71■□□□□ 0.27
SNCA-203ENST00000394986 EGR1P18146 543 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms