RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 VSTM2AQ8TAG5 236 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 TTRP02766 147 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 SLC25A5P05141 298 aaKnown RBP13.37□□□□□ -0.27
CCDC50-201ENST00000392455 MELTFP08582 738 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 SSX8Q7RTT4 187 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 RXFP4Q8TDU9 374 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 C3orf30Q96M34 536 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 MYOZ1Q9NP98 299 aaPredicted RBP13.37□□□□□ -0.27
CCDC50-201ENST00000392455 TRBV4-1A0A0J9YWV2 114 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 FUT6P51993 359 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 SLC5A12Q1EHB4 618 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 PHOSPHO2Q8TCD6 241 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.36□□□□□ -0.27
CCDC50-201ENST00000392455 TREX1Q9NSU2 369 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 UQCC1Q9NVA1 299 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 GASTP01350 101 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 PDPNQ86YL7 162 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 ZNF552Q9H707 407 aaPredicted RBP13.36□□□□□ -0.27
CCDC50-201ENST00000392455 PITPNC1Q9UKF7 332 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 M0QYG6 137 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 PLPP7Q8NBV4 271 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 ARRDC2Q8TBH0 407 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 KTI12Q96EK9 354 aaPredicted RBP13.36□□□□□ -0.27
CCDC50-201ENST00000392455 LHX3Q9UBR4 397 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 UBE2L5PA0A1B0GUS4 154 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 H7C1C5 153 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 DSCR3O14972 297 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 CSO75390 466 aaKnown RBP13.36□□□□□ -0.27
CCDC50-201ENST00000392455 FZD2Q14332 565 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 MED25Q71SY5 747 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 ANGPTL4Q9BY76 406 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 MMP24Q9Y5R2 645 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 ECM29Q5VYK3 1845 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 KIF13BQ9NQT8 1826 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 MBPP02686 304 aaPredicted RBP13.36□□□□□ -0.27
CCDC50-201ENST00000392455 LGALS7P47929 136 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 CCR6P51684 374 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 A0A1B0GX78 115 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 RPS4Y1P22090 263 aaKnown RBP13.36□□□□□ -0.27
CCDC50-201ENST00000392455 HOXD9P28356 352 aaPredicted RBP13.36□□□□□ -0.27
CCDC50-201ENST00000392455 CEBPDP49716 269 aaPredicted RBP13.36□□□□□ -0.27
CCDC50-201ENST00000392455 FUNDC1Q8IVP5 155 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 GAL3ST2Q9H3Q3 398 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 CA10Q9NS85 328 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 A0A1B0GV72 72 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 GSTZ1O43708 216 aaPredicted RBP13.36□□□□□ -0.27
CCDC50-201ENST00000392455 NUDT3O95989 172 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 CRYABP02511 175 aaKnown RBP13.36□□□□□ -0.27
CCDC50-201ENST00000392455 FABP4P15090 132 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 CD82P27701 267 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 IL24Q13007 206 aa13.36□□□□□ -0.27
CCDC50-201ENST00000392455 A0A1B0GUL6 1792 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 CTDSP2O14595 271 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 ORM2P19652 201 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 ZDHHC22Q8N966 263 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 ARRDC5A6NEK1 342 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 OPRK1P41145 380 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 EXOSC2Q13868 293 aaKnown RBP13.35□□□□□ -0.27
CCDC50-201ENST00000392455 SMIM19Q96E16 107 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 CCL11P51671 97 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 SLC35E4Q6ICL7 350 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 INSM2Q96T92 566 aaPredicted RBP13.35□□□□□ -0.27
CCDC50-201ENST00000392455 ADGRL4Q9HBW9 690 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 SIRT3Q9NTG7 399 aaPredicted RBP13.35□□□□□ -0.27
CCDC50-201ENST00000392455 TDRD15B5MCY1 1934 aaKnown RBP13.35□□□□□ -0.27
CCDC50-201ENST00000392455 LANCL1O43813 399 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 GYPAP02724 150 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 TMEM267Q0VDI3 215 aaPredicted RBP13.35□□□□□ -0.27
CCDC50-201ENST00000392455 TMEM207Q6UWW9 146 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 C1RLQ9NZP8 487 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 M0R135 149 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 GFRA2O00451 464 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 SLCO2B1O94956 709 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 NXPH3O95157 252 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 ID4P47928 161 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 C19orf54Q5BKX5 351 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 LINC00696Q6ZRV3 163 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 ZNF799Q96GE5 643 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 UFC1Q9Y3C8 167 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 CDX1P47902 265 aaPredicted RBP13.35□□□□□ -0.27
CCDC50-201ENST00000392455 ACSM5Q6NUN0 579 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 OR4D10Q8NGI6 311 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 CTRCQ99895 268 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 WASHC3Q9Y3C0 194 aa13.35□□□□□ -0.27
CCDC50-201ENST00000392455 NPIPB6E9PJ23 425 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 K7EQS6 105 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 CLDN18P56856 261 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 CDC20Q12834 499 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 TMED6Q8WW62 240 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 FIZ1Q96SL8 496 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 YLPM1P49750 1951 aaKnown RBP13.34□□□□□ -0.27
CCDC50-201ENST00000392455 PDE6DO43924 150 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 CST4P01036 141 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 ID1P41134 155 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 CSNK1EP49674 416 aaKnown RBP13.34□□□□□ -0.27
CCDC50-201ENST00000392455 C5orf17Q8NAS9 161 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 SMIM14Q96QK8 99 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 RCL1Q9Y2P8 373 aaKnown RBP13.34□□□□□ -0.27
CCDC50-201ENST00000392455 SDHAP31040 664 aa13.34□□□□□ -0.27
CCDC50-201ENST00000392455 BRS3P32247 399 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms