RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 CD86P42081 329 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 PPICP45877 212 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 AP1S2P56377 157 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 RAB10P61026 200 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 RAB11AP62491 216 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 ST3GAL4Q11206 333 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 ENDOGQ14249 297 aaKnown RBP0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 TMEM176BQ3YBM2 270 aaPredicted RBP0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 ACSBG2Q5FVE4 666 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 CCDC183Q5T5S1 534 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 N4BP2L1Q5TBK1 243 aaPredicted RBP0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 PRAMEF5Q5TYX0 476 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 PRAMEF6Q5VXH4 476 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 THOC7Q6I9Y2 204 aaKnown RBP0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 C22orf42Q6IC83 251 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 METAP1DQ6UB28 335 aaPredicted RBP0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 ZYG11AQ6WRX3 759 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 ZNF767PQ75MW2 155 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 SLC16A14Q7RTX9 510 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 LYZL2Q7Z4W2 148 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 NANOGNBQ7Z5D8 188 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 TMEM144Q7Z5S9 345 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 NAA40Q86UY6 237 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 HORMAD1Q86X24 394 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 CMTM1Q8IZ96 169 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 FAM9BQ8IZU0 186 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 ZNF567Q8N184 647 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 C2orf73Q8N5S3 287 aaPredicted RBP0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 ZNF738Q8NE65 137 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 OR4A4PQ8NGN8 299 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 LYPD6BQ8NI32 183 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 KCNG3Q8TAE7 436 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 NUBPLQ8TB37 319 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 BAALCQ8WXS3 180 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 TRIB3Q96RU7 358 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 ZBTB18Q99592 522 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 MS4A8Q9BY19 250 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 RHOFQ9HBH0 211 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 ZNF286AQ9HBT8 521 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 ABCB9Q9NP78 766 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 FAM206AQ9NX38 181 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 DCAF16Q9NXF7 216 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 ZNF780BQ9Y6R6 833 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 ICOSQ9Y6W8 199 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 PCDH11XQ9BZA7 1347 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 JCADQ9P266 1359 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 TSPOAP1O95153 1857 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 NCBP2LA6PVI3 153 aaKnown RBP0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 TP53I11O14683 189 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 LSM1O15116 133 aaKnown RBP0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 WBP4O75554 376 aaKnown RBP0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 UPK1BO75841 260 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 GUCA1CO95843 209 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 IGKV1-39P01597 117 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 HBE1P02100 147 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 IGKV1D-39P04432 117 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 GPX1P07203 203 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 HOXB8P17481 243 aaPredicted RBP0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 HLA-GP17693 338 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 CSNK2A2P19784 350 aaPredicted RBP0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 RAB4AP20338 218 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 RAB5AP20339 215 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 SLC6A1P30531 599 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 CD70P32970 193 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 MAGEA3P43357 314 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 TUFMP49411 452 aaKnown RBP0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 ATP5IP56385 69 aaPredicted RBP0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 GPM6BQ13491 265 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 DOC2AQ14183 400 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 TFDP2Q14188 446 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 ZMYND11Q15326 602 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 KLHL40Q2TBA0 621 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 C6orf99Q4VX62 202 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 HSP90AB3PQ58FF7 597 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 SLC8B1Q6J4K2 584 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 SLC25A25Q6KCM7 469 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 RWDD4Q6NW29 188 aaKnown RBP0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 SPESP1Q6UW49 350 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 C10orf126Q8N4M7 172 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 ZDHHC22Q8N966 263 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 WDR31Q8NA23 367 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 TTC29Q8NA56 475 aaPredicted RBP0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 OR7G2Q8NG99 324 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 OR8A1Q8NGG7 326 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 OR5H2Q8NGV7 314 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 OR5K2Q8NHB8 316 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 ORAOV1Q8WV07 137 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 CAPSLQ8WWF8 208 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 ITLN2Q8WWU7 325 aaPredicted RBP0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 CACNG8Q8WXS5 425 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 S100PBPQ96BU1 408 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 TUBGCP3Q96CW5 907 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 RCN3Q96D15 328 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 SGTBQ96EQ0 304 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 PPP1R36Q96LQ0 422 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 DERL3Q96Q80 235 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 TTTY12Q9BZ98 90 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 PKIBQ9C010 78 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 RACGAP1Q9H0H5 632 aa0.31□□□□□ -2.36
SNORD28B-201ENST00000390993 PORCNQ9H237 461 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms