RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 PHPT1Q9NRX4 125 aaPredicted RBP13.01□□□□□ -0.33
VPS9D1-201ENST00000389386 B9D1Q9UPM9 204 aa13.01□□□□□ -0.33
VPS9D1-201ENST00000389386 MPDZO75970 2070 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 DVL1O14640 695 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 DEDDO75618 318 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 CXCR1P25024 350 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 PPP1CCP36873 323 aaKnown RBP13□□□□□ -0.33
VPS9D1-201ENST00000389386 CD200P41217 278 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 KIR2DL1P43626 348 aaPredicted RBP13□□□□□ -0.33
VPS9D1-201ENST00000389386 DNASE1L1P49184 302 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 SMAD4Q13485 552 aaKnown RBP13□□□□□ -0.33
VPS9D1-201ENST00000389386 PEG10Q86TG7 708 aaKnown RBP13□□□□□ -0.33
VPS9D1-201ENST00000389386 OR10J5Q8NHC4 309 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 CCL4L1Q8NHW4 92 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 GINS3Q9BRX5 216 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 G6PC3Q9BUM1 346 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 OR11A1Q9GZK7 315 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13□□□□□ -0.33
VPS9D1-201ENST00000389386 GRHPRQ9UBQ7 328 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 A0A087WZY1 265 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 TLCD2A6NGC4 264 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 NKX2-2O95096 273 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 IL18BPO95998 194 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 IGKV1D-16P01601 117 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 CT62P0C5K7 136 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 PEBP1P30086 187 aaKnown RBP13□□□□□ -0.33
VPS9D1-201ENST00000389386 UBE2KP61086 200 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 QRFPP83859 136 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 MGAT2Q10469 447 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 VAX1Q5SQQ9 334 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 SLC22A25Q6T423 547 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 DCXRQ7Z4W1 244 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 CATSPERDQ86XM0 798 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 OR52E1Q8NGJ3 308 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 OR14K1Q8NGZ2 314 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 ELSPBP1Q96BH3 223 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 OBP2AQ9NY56 170 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 OR14J1Q9UGF5 321 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 STRAPQ9Y3F4 350 aaKnown RBP13□□□□□ -0.33
VPS9D1-201ENST00000389386 MMACHCQ9Y4U1 282 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 HEATR5AQ86XA9 2040 aa13□□□□□ -0.33
VPS9D1-201ENST00000389386 TMEM269A0A1B0GVZ9 245 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 PRH1P02810 166 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 FPR2P25090 351 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 TLX1P31314 330 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 HNRNPKP61978 463 aaKnown RBP eCLIP12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 IAH1Q2TAA2 248 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 PTCRAQ6ISU1 281 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 LANCL3Q6ZV70 420 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 SHISA5Q8N114 240 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 C10orf53Q8N6V4 93 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 RELTQ969Z4 430 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 TSPAN32Q96QS1 320 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 OPN3Q9H1Y3 402 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 CNTD2Q9H8S5 307 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 UNKLQ9H9P5 680 aaKnown RBP12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 WFDC1Q9HC57 220 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 TDRD6O60522 2096 aaKnown RBP12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 A0A1B0GV50 99 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 MED19A0JLT2 244 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 HSD17B6O14756 317 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 SLC10A1Q14973 349 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 ZNF74Q16587 644 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 PCK2Q16822 640 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 DEFB134Q4QY38 66 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 ZNF776Q68DI1 518 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 LFNGQ8NES3 379 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 RNASEH2CQ8TDP1 164 aaKnown RBP12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 SNHG12Q9BXW3 62 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 Q9N2J8 555 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 DAPP1Q9UN19 280 aa12.99□□□□□ -0.33
VPS9D1-201ENST00000389386 C2CD4DB7Z1M9 353 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 RENP00797 406 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 GLRA1P23415 457 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 APLNRP35414 380 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 PPM1FP49593 454 aaPredicted RBP12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 RAC1P63000 192 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 DLK1P80370 383 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 PRICKLE4Q2TBC4 344 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 TMEM156Q8N614 296 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 OR4N2Q8NGD1 307 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 OR13C3Q8NGS6 347 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 SVIPQ8NHG7 77 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 ANKRD9Q96BM1 317 aaPredicted RBP12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 ACTR3CQ9C0K3 210 aaPredicted RBP12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 FIGNL2A6NMB9 653 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 LMX1BO60663 402 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 ADH1BP00325 375 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 ZNF25P17030 456 aaPredicted RBP12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 GLIPR1P48060 266 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 RPS21P63220 83 aaKnown RBP12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 ROM1Q03395 351 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 EMC4Q5J8M3 183 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 GPR137CQ8N3F9 429 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 NAXEQ8NCW5 288 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 TSACCQ96A04 125 aaPredicted RBP12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 R3HDM4Q96D70 268 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 SCGB3A2Q96PL1 93 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 LPAR4Q99677 370 aa12.98□□□□□ -0.33
VPS9D1-201ENST00000389386 SH3BGRL3Q9H299 93 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms