RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 CXCL16Q9H2A7 254 aa0.05□□□□□ -2.4
RNU6-1040P-201ENST00000383974 CCDC59Q9P031 241 aaKnown RBP0.05□□□□□ -2.4
RNU6-1040P-201ENST00000383974 CLEC4AQ9UMR7 237 aa0.05□□□□□ -2.4
RNU6-1040P-201ENST00000383974 COL4A2P08572 1712 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 ZNF729A6NN14 1252 aaPredicted RBP0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 KNCNA6PVL3 124 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 LEUTXA8MZ59 168 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 H3BRN7 92 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 CRTAPO75718 401 aaPredicted RBP0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 NAPSAO96009 420 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 HPRT1P00492 218 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 GZMAP12544 262 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 USF1P22415 310 aaPredicted RBP0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 MYL9P24844 172 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 PRSS3P35030 304 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 CD86P42081 329 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 DOC2AQ14183 400 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 ENDOGQ14249 297 aaKnown RBP0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 TMEM236Q5W0B7 351 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 CMTM1Q8IZ96 169 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 BPIFB6Q8NFQ5 453 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 ERP44Q9BS26 406 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 SFXN3Q9BWM7 321 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 RDH14Q9HBH5 336 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 MROH5Q6ZUA9 1318 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 USP47Q96K76 1375 aa0.04□□□□□ -2.4
RNU6-1040P-201ENST00000383974 NUP205Q92621 2012 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 C15orf38-AP3S2A0A0A6YYH1 394 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 AIM2O14862 343 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 SEC11BP0C7V7 166 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 ZNF22P17026 224 aaPredicted RBP0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 PBLDP30039 288 aaPredicted RBP0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 MYCNOSP40205 109 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 PPICP45877 212 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 TUFMP49411 452 aaKnown RBP0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 ERFP50548 548 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 RAB7AP51149 207 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 AIF1P55008 147 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 TMEM176BQ3YBM2 270 aaPredicted RBP0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 KDM4DQ6B0I6 523 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 CMC1Q7Z7K0 106 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 IQCKQ8N0W5 287 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 C3orf22Q8N5N4 141 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 C2orf73Q8N5S3 287 aaPredicted RBP0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 OR10W1Q8NGF6 305 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 OR2V1Q8NHB1 315 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 C10orf105Q8TEF2 133 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 TEAD3Q99594 435 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 RSPH9Q9H1X1 276 aaPredicted RBP0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 ZNF160Q9HCG1 818 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 TMEM38BQ9NVV0 291 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 PSMC3IPQ9P2W1 217 aaPredicted RBP0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 SLC7A11Q9UPY5 501 aa0.03□□□□□ -2.4
RNU6-1040P-201ENST00000383974 RGS12O14924 1447 aa0.03□□□□□ -2.41
RNU6-1040P-201ENST00000383974 CRB1P82279 1406 aa0.03□□□□□ -2.41
RNU6-1040P-201ENST00000383974 GPR98Q8WXG9 6306 aa0.03□□□□□ -2.41
RNU6-1040P-201ENST00000383974 SMCO2A6NFE2 343 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 ERICH4A6NGS2 130 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 PSPHP1O15172 72 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 GMFGO60234 142 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 CXorf1O96002 111 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 CST1P01037 141 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 KRT14P02533 472 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 GZMBP10144 247 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 RAB4AP20338 218 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 OR1E1P30953 314 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 G6PCP35575 357 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 SLC1A1P43005 524 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 POLR2FP61218 127 aaKnown RBP0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 RPS15AP62244 130 aaKnown RBP0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 SFXN5Q8TD22 340 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 LMX1AQ8TE12 382 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 CAPSLQ8WWF8 208 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 RSPH1Q8WYR4 309 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 ISG20Q96AZ6 181 aaKnown RBP0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 TUBGCP3Q96CW5 907 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 SGTBQ96EQ0 304 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 C16orf45Q96MC5 204 aaPredicted RBP0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 ALS2CR12Q96Q35 445 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 API5Q9BZZ5 524 aaKnown RBP0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 VCX2Q9H322 139 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 MRM3Q9HC36 420 aaKnown RBP0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 HPF1Q9NWY4 346 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 OTOFQ9HC10 1997 aa0.02□□□□□ -2.41
RNU6-1040P-201ENST00000383974 A0A0G2JMP0 313 aa0.01□□□□□ -2.41
RNU6-1040P-201ENST00000383974 A0A0X1KG70 313 aa0.01□□□□□ -2.41
RNU6-1040P-201ENST00000383974 IL1BP01584 269 aa0.01□□□□□ -2.41
RNU6-1040P-201ENST00000383974 TEAD1P28347 426 aa0.01□□□□□ -2.41
RNU6-1040P-201ENST00000383974 SLC6A1P30531 599 aa0.01□□□□□ -2.41
RNU6-1040P-201ENST00000383974 GNRHRP30968 328 aa0.01□□□□□ -2.41
RNU6-1040P-201ENST00000383974 COILP38432 576 aaPredicted RBP0.01□□□□□ -2.41
RNU6-1040P-201ENST00000383974 TRAM2Q15035 370 aa0.01□□□□□ -2.41
RNU6-1040P-201ENST00000383974 MAPRE2Q15555 327 aa0.01□□□□□ -2.41
RNU6-1040P-201ENST00000383974 CST6Q15828 149 aa0.01□□□□□ -2.41
RNU6-1040P-201ENST00000383974 REEP3Q6NUK4 255 aa0.01□□□□□ -2.41
RNU6-1040P-201ENST00000383974 ZYG11AQ6WRX3 759 aa0.01□□□□□ -2.41
RNU6-1040P-201ENST00000383974 APOBEC3DQ96AK3 386 aaPredicted RBP0.01□□□□□ -2.41
RNU6-1040P-201ENST00000383974 DNAJC30Q96LL9 226 aa0.01□□□□□ -2.41
RNU6-1040P-201ENST00000383974 PPP1R36Q96LQ0 422 aa0.01□□□□□ -2.41
RNU6-1040P-201ENST00000383974 UQCC2Q9BRT2 126 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms