RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 ABHD1Q96SE0 405 aa10.87□□□□□ -0.67
GABPB1-203ENST00000380877 A0A0B4J2A0 478 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 TMEM272A0A1B0GTI8 110 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 A0A1B0GUH1 482 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 TRIM64A6NGJ6 449 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 POM121CA8CG34 1229 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 GIPP09681 153 aaPredicted RBP10.86□□□□□ -0.67
GABPB1-203ENST00000380877 ZNF17P17021 662 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 EIF2S3P41091 472 aaKnown RBP10.86□□□□□ -0.67
GABPB1-203ENST00000380877 OR2T2Q6IF00 324 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 DMBX1Q8NFW5 382 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 OR4S1Q8NGB4 309 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 ZNF385AQ96PM9 386 aaKnown RBP10.86□□□□□ -0.67
GABPB1-203ENST00000380877 SHPKQ9UHJ6 478 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 RTTNQ86VV8 2226 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 MEIKINA0A087WXM9 373 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 H3BMH7 237 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 MPPED1O15442 326 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 S100A11P31949 105 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 GNG3P63215 75 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 PLA2G7Q13093 441 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 SLC30A7Q8NEW0 376 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 RNF133Q8WVZ7 376 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 ANGPTL4Q9BY76 406 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 TGFBR3LH3BV60 316 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 HSD17B6O14756 317 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 MSTNO14793 375 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 CTAG2O75638 210 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 RGS11O94810 467 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 SP1P08047 785 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 PRSS12P56730 875 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 BLOC1S1P78537 153 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 PNLIPRP3Q17RR3 467 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 RGS7BPQ6MZT1 257 aaPredicted RBP10.86□□□□□ -0.67
GABPB1-203ENST00000380877 TMEM200AQ86VY9 491 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 GPX7Q96SL4 187 aaPredicted RBP10.86□□□□□ -0.67
GABPB1-203ENST00000380877 PLXNA3P51805 1871 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 CCL2P13500 99 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 RPA2P15927 270 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 NDUFB7P17568 137 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 IL11P20809 199 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 DUSP1P28562 367 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 FCGR2CP31995 323 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 PTGER4P35408 488 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 OR2W3Q7Z3T1 314 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 SUMF1Q8NBK3 374 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 FLVCR1-AS1Q8TAF5 88 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 PAQR8Q8TEZ7 354 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 CMBLQ96DG6 245 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 LIN37Q96GY3 246 aaPredicted RBP10.86□□□□□ -0.67
GABPB1-203ENST00000380877 TMEM100Q9NV29 134 aa10.86□□□□□ -0.67
GABPB1-203ENST00000380877 HEATR5BQ9P2D3 2071 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 OR4E1P0C645 316 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 NFYBP25208 207 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 ZP4Q12836 540 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 BAMBIQ13145 260 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 CREB3L2Q70SY1 520 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 TINAGL1Q9GZM7 467 aaPredicted RBP10.85□□□□□ -0.67
GABPB1-203ENST00000380877 CNTD2Q9H8S5 307 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 PLEKHF2Q9H8W4 249 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 ZNF71Q9NQZ8 489 aaPredicted RBP10.85□□□□□ -0.67
GABPB1-203ENST00000380877 MTFP1Q9UDX5 166 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 EDARQ9UNE0 448 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 DCTN6O00399 190 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 TXNDC12O95881 172 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 FUT3P21217 361 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 BMP5P22003 454 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 RPP30P78346 268 aaKnown RBP10.85□□□□□ -0.67
GABPB1-203ENST00000380877 TMEM229BQ8NBD8 167 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 NMNAT2Q9BZQ4 307 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 MRPS18BQ9Y676 258 aaKnown RBP10.85□□□□□ -0.67
GABPB1-203ENST00000380877 SIRT4Q9Y6E7 314 aaPredicted RBP10.85□□□□□ -0.67
GABPB1-203ENST00000380877 WDR1O75083 606 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 ZIC2O95409 532 aaPredicted RBP10.85□□□□□ -0.67
GABPB1-203ENST00000380877 MMP16P51512 607 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 PCOLCEQ15113 449 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 CATSPERDQ86XM0 798 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 BOD1Q96IK1 185 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 FAM234AQ9H0X4 552 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 LSM2Q9Y333 95 aaKnown RBP10.85□□□□□ -0.67
GABPB1-203ENST00000380877 PRELID3BQ9Y3B1 194 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 FLVCR1Q9Y5Y0 555 aa10.85□□□□□ -0.67
GABPB1-203ENST00000380877 SNRPGP15A8MWD9 76 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 GGTLC2Q14390 218 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 TGIF1Q15583 401 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 OR52W1Q6IF63 320 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 C22orf15Q8WYQ4 148 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 ARHGAP5-AS1Q96IT6 56 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 NDRG3Q9UGV2 375 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 SLC23A1Q9UHI7 598 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 DOCK8Q8NF50 2099 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 TERTO14746 1132 aaKnown RBP10.84□□□□□ -0.67
GABPB1-203ENST00000380877 COX6A1P12074 109 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 LAIR2Q6ISS4 152 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 MRPL41Q8IXM3 137 aaKnown RBP10.84□□□□□ -0.67
GABPB1-203ENST00000380877 OR2AK2Q8NG84 335 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 PCNPQ8WW12 178 aaKnown RBP10.84□□□□□ -0.67
GABPB1-203ENST00000380877 RIMS4Q9H426 269 aaPredicted RBP10.84□□□□□ -0.67
GABPB1-203ENST00000380877 FBXO7Q9Y3I1 522 aa10.84□□□□□ -0.67
GABPB1-203ENST00000380877 PI4KAP42356 2102 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms