RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 RGS11O94810 467 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 FAHP16930 419 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 MAGEA5P43359 124 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 HTR5AP47898 357 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 DHODHQ02127 395 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 PPA1Q15181 289 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 RNPS1Q15287 305 aaKnown RBP20.18■□□□□ 0.82
VPS16-201ENST00000380443 SLC7A5P1Q8MH63 180 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 CMBLQ96DG6 245 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 REEP6Q96HR9 211 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 TMPRSS13Q9BYE2 586 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 BCO1Q9HAY6 547 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 OR14I1A6ND48 311 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 CA11O75493 328 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 TPOP07202 933 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 GNB3P16520 340 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 MEOX1P50221 254 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 CNN3Q15417 329 aaKnown RBP20.18■□□□□ 0.82
VPS16-201ENST00000380443 SNAI3Q3KNW1 292 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 TMEM104Q8NE00 496 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 OR2AK2Q8NG84 335 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 OR11H4Q8NGC9 324 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 TM2D1Q9BX74 207 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 HES7Q9BYE0 225 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 WNT5BQ9H1J7 359 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 PIPOXQ9P0Z9 390 aa20.18■□□□□ 0.82
VPS16-201ENST00000380443 ELF5Q9UKW6 265 aaPredicted RBP20.18■□□□□ 0.82
VPS16-201ENST00000380443 H3BUI4 141 aa20.17■□□□□ 0.82
VPS16-201ENST00000380443 LCATP04180 440 aa20.17■□□□□ 0.82
VPS16-201ENST00000380443 FOXC1Q12948 553 aa20.17■□□□□ 0.82
VPS16-201ENST00000380443 ZFP62Q8NB50 900 aaPredicted RBP20.17■□□□□ 0.82
VPS16-201ENST00000380443 TECTBQ96PL2 329 aa20.17■□□□□ 0.82
VPS16-201ENST00000380443 SLC6A7Q99884 636 aa20.17■□□□□ 0.82
VPS16-201ENST00000380443 OCSTAMPQ9BR26 566 aa20.17■□□□□ 0.82
VPS16-201ENST00000380443 POFUT1Q9H488 388 aa20.17■□□□□ 0.82
VPS16-201ENST00000380443 FAM166BA8MTA8 275 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 MMP7P09237 267 aaPredicted RBP20.16■□□□□ 0.82
VPS16-201ENST00000380443 FCGR2AP12318 317 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 SNRPD2P62316 118 aaKnown RBP20.16■□□□□ 0.82
VPS16-201ENST00000380443 GK2Q14410 553 aaPredicted RBP20.16■□□□□ 0.82
VPS16-201ENST00000380443 SLC10A1Q14973 349 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 C4orf46Q504U0 113 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 TSPO2Q5TGU0 170 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 GALNTL5Q7Z4T8 443 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 SKA3Q8IX90 412 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 TNFAIP8L1Q8WVP5 186 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 NICN1Q9BSH3 213 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 SPEGQ15772 3267 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 A0A0A6YYD4 124 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 XRCC2O43543 280 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 CELA3AP09093 270 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 OR4E1P0C645 316 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 COX5BP10606 129 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 PPIAP62937 165 aaKnown RBP20.16■□□□□ 0.82
VPS16-201ENST00000380443 CXADRP78310 365 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 CLVS2Q5SYC1 327 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 ZBTB37Q5TC79 503 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 FAHD2BQ6P2I3 314 aaPredicted RBP20.16■□□□□ 0.82
VPS16-201ENST00000380443 CRIP3Q6Q6R5 217 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 RNF144BQ7Z419 303 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 MUC20Q8N307 709 aaPredicted RBP20.16■□□□□ 0.82
VPS16-201ENST00000380443 NUDCD2Q8WVJ2 157 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 FAHD2AQ96GK7 314 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 PRRG4Q9BZD6 226 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 PRDM14Q9GZV8 571 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 SLC6A15Q9H2J7 730 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 KCNK7Q9Y2U2 307 aa20.16■□□□□ 0.82
VPS16-201ENST00000380443 CDRT15L2A8MXV6 281 aa20.15■□□□□ 0.82
VPS16-201ENST00000380443 ZNF587BE7ETH6 402 aa20.15■□□□□ 0.82
VPS16-201ENST00000380443 MFNGO00587 321 aa20.15■□□□□ 0.82
VPS16-201ENST00000380443 SSX5O60225 188 aa20.15■□□□□ 0.82
VPS16-201ENST00000380443 IFNA6P05013 189 aa20.15■□□□□ 0.82
VPS16-201ENST00000380443 CPT2P23786 658 aa20.15■□□□□ 0.82
VPS16-201ENST00000380443 SRYQ05066 204 aa20.15■□□□□ 0.82
VPS16-201ENST00000380443 SLC22A6Q4U2R8 563 aa20.15■□□□□ 0.82
VPS16-201ENST00000380443 OR51T1Q8NGJ9 327 aa20.15■□□□□ 0.82
VPS16-201ENST00000380443 OR13C8Q8NGS7 320 aa20.15■□□□□ 0.82
VPS16-201ENST00000380443 EIF3KQ9UBQ5 218 aaKnown RBP20.15■□□□□ 0.82
VPS16-201ENST00000380443 FOXI3A8MTJ6 420 aaPredicted RBP20.14■□□□□ 0.81
VPS16-201ENST00000380443 SOCS1O15524 211 aa20.14■□□□□ 0.81
VPS16-201ENST00000380443 TMEM50BP56557 158 aa20.14■□□□□ 0.81
VPS16-201ENST00000380443 PLAC9Q5JTB6 97 aa20.14■□□□□ 0.81
VPS16-201ENST00000380443 VAX1Q5SQQ9 334 aa20.14■□□□□ 0.81
VPS16-201ENST00000380443 ATPAF1Q5TC12 328 aaPredicted RBP20.14■□□□□ 0.81
VPS16-201ENST00000380443 TMEM42Q69YG0 159 aa20.14■□□□□ 0.81
VPS16-201ENST00000380443 TMEM178AQ8NBL3 297 aa20.14■□□□□ 0.81
VPS16-201ENST00000380443 OR4S1Q8NGB4 309 aa20.14■□□□□ 0.81
VPS16-201ENST00000380443 OR52B4Q8NGK2 314 aa20.14■□□□□ 0.81
VPS16-201ENST00000380443 AKR7LQ8NHP1 331 aa20.14■□□□□ 0.81
VPS16-201ENST00000380443 BANF2Q9H503 90 aa20.14■□□□□ 0.81
VPS16-201ENST00000380443 CA10Q9NS85 328 aa20.14■□□□□ 0.81
VPS16-201ENST00000380443 KNTC1P50748 2209 aa20.14■□□□□ 0.81
VPS16-201ENST00000380443 SERPINE3A8MV23 424 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 G3V3Q6 166 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 FCER2P06734 321 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 MGMTP16455 207 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 RFC3P40938 356 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 LGALSLQ3ZCW2 172 aaPredicted RBP20.13■□□□□ 0.81
VPS16-201ENST00000380443 SCGB2B2Q4G0G5 96 aa20.13■□□□□ 0.81
VPS16-201ENST00000380443 SFRP5Q5T4F7 317 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms