RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 AANATQ16613 207 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 CLVS2Q5SYC1 327 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 APOBEC3DQ96AK3 386 aaPredicted RBP12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 SF3B5Q9BWJ5 86 aaKnown RBP12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 ENY2Q9NPA8 101 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 RALGAPA1Q6GYQ0 2036 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 HS3ST1O14792 307 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 RGS13O14921 159 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 NKX2-8O15522 239 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 GSG1Q2KHT4 349 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 PLXDC2Q6UX71 529 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 TUSC5Q8IXB3 177 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 PRSS35Q8N3Z0 413 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 OR52B4Q8NGK2 314 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 ANGPTL4Q9BY76 406 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 TMEM231Q9H6L2 316 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 B3GAT1Q9P2W7 334 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 ZNF816-ZNF321PA0A0X1KG74 233 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 AQP8O94778 261 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 PMS2P2O95744 297 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 MMP15P51511 669 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 NLRC3Q7RTR2 1065 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 KISS1RQ969F8 398 aaPredicted RBP12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 ZNF71Q9NQZ8 489 aaPredicted RBP12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 LSM2Q9Y333 95 aaKnown RBP12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 PLA2G10O15496 165 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 THBS4P35443 961 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 KISS1Q15726 138 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 OR52N4Q8NGI2 321 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 OR51A4Q8NGJ6 313 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 OCSTAMPQ9BR26 566 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 RTL8AQ9BWD3 113 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 KLHDC2Q9Y2U9 406 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 CACNA1DQ01668 2161 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 FRMPD3Q5JV73 1810 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 PIGBOS1A0A0B4J2F0 54 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 ADAM11O75078 769 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 TMEM127O75204 238 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 SP1P08047 785 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 CCL2P13500 99 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 RAD52P43351 418 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 LUMP51884 338 aaPredicted RBP12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 OR2A2Q6IF42 318 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 C17orf82Q86X59 251 aaPredicted RBP12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 GPX7Q96SL4 187 aaPredicted RBP12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 MESP1Q9BRJ9 268 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 PRMT8Q9NR22 394 aaPredicted RBP12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 GNG12Q9UBI6 72 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 ST3GAL6Q9Y274 331 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 PCNX1Q96RV3 2341 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 TRGV8A0A0C4DH27 118 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 H3BMH7 237 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 DEGS1O15121 323 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 EFSO43281 561 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 SPRY1O43609 319 aaPredicted RBP12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 ZNF883P0CG24 379 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 ZNF728P0DKX0 622 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 NANOS3P60323 173 aaKnown RBP12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 LSM6P62312 80 aaKnown RBP12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 LHFPL2Q6ZUX7 228 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 ZDHHC23Q8IYP9 409 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 OR10R2Q8NGX6 335 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 V9GYH0 126 aa12.57□□□□□ -0.4
SHROOM1-203ENST00000378679 PRR19A6NJB7 356 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 TMEM229AB2RXF0 380 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 GMDSO60547 372 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 LYZL6O75951 148 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 ACP1P24666 158 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 EGR4Q05215 589 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 OR6S1Q8NH40 331 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 FBXW5Q969U6 566 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 SMIM3Q9BZL3 60 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 SPACA1Q9HBV2 294 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 ZFP57Q9NU63 452 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 DHRS3O75911 302 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 RHOUQ7L0Q8 258 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 OR8B12Q8NGG6 310 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 OR1J1Q8NGS3 322 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 SCGB1C1Q8TD33 95 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 LIN37Q96GY3 246 aaPredicted RBP12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 TRAV8-7A0A075B6U6 113 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 TRIM64A6NGJ6 449 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 FBXO24O75426 580 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 PI3P19957 117 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 CD82P27701 267 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 DUSP1P28562 367 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 MFGE8Q08431 387 aaPredicted RBP12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 EDDM3AQ14507 147 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 PHLDA2Q53GA4 152 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 GFRALQ6UXV0 394 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 PPP1R32Q7Z5V6 425 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 ZNF573Q86YE8 665 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 FBXL14Q8N1E6 418 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 OR56B2PQ8NGI1 322 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 EIF5A2Q9GZV4 153 aaKnown RBP12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 PARP12Q9H0J9 701 aaKnown RBP12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 GHRLQ9UBU3 117 aa12.56□□□□□ -0.4
SHROOM1-203ENST00000378679 LEUTXA8MZ59 168 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 ZNF732B4DXR9 585 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 TXNDC12O95881 172 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms