RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 CELF5Q8N6W0 485 aaKnown RBP7.94□□□□□ -1.14
LIG3-202ENST00000378526 NTPCRQ9BSD7 190 aaKnown RBP7.94□□□□□ -1.14
LIG3-202ENST00000378526 IGSF5Q9NSI5 407 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 DEPDC5O75140 1603 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 KIR2DL1P43626 348 aaPredicted RBP7.94□□□□□ -1.14
LIG3-202ENST00000378526 KIR2DL2P43627 348 aaPredicted RBP7.94□□□□□ -1.14
LIG3-202ENST00000378526 LMAN2Q12907 356 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 NNATQ16517 81 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 MRPL52Q86TS9 123 aaKnown RBP7.94□□□□□ -1.14
LIG3-202ENST00000378526 OR5C1Q8NGR4 320 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 SPHK2Q9NRA0 654 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 PLSCR4Q9NRQ2 329 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 ELOVL5Q9NYP7 299 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 SLC17A4Q9Y2C5 497 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 UFC1Q9Y3C8 167 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 ABCA1O95477 2261 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 H3BQ15 152 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 CCL16O15467 120 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 MPC2O95563 127 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 HLA-DQA1P01909 254 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 HBZP02008 142 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 PRDX4Q13162 271 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 PDPNQ86YL7 162 aa7.94□□□□□ -1.14
LIG3-202ENST00000378526 PRAMEF26H0Y7S4 382 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 TMEM189-UBE2V1I3L0A0 370 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 IAPPP10997 89 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 CD40P25942 277 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 POU3F1Q03052 451 aaPredicted RBP7.93□□□□□ -1.14
LIG3-202ENST00000378526 HMGN2P46Q86SG4 172 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 ISOC2Q96AB3 205 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 DMAC2Q9NW81 257 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 FEZF1A0PJY2 475 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 MOSPD3O75425 235 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 TEAD1P28347 426 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 MRPL2Q5T653 305 aaKnown RBP7.93□□□□□ -1.14
LIG3-202ENST00000378526 MRPL54Q6P161 138 aaKnown RBP7.93□□□□□ -1.14
LIG3-202ENST00000378526 LRRC18Q8N456 261 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 WDFY2Q96P53 400 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 CDK2AP1O14519 115 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 LINC00614P0C842 121 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 CCR5P51681 352 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 SRYQ05066 204 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 SYT14P1Q58G82 188 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 PSAPL1Q6NUJ1 521 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 PLXDC1Q8IUK5 500 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 CHST6Q9GZX3 395 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 SMG9Q9H0W8 520 aaKnown RBP7.93□□□□□ -1.14
LIG3-202ENST00000378526 RBKSQ9H477 322 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 CYSLTR2Q9NS75 346 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 DECR2Q9NUI1 292 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 PYCARD-AS1I3L0S3 204 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 SPINK4O60575 86 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 GALR3O60755 368 aaPredicted RBP7.93□□□□□ -1.14
LIG3-202ENST00000378526 FKBP1AP62942 108 aaKnown RBP7.93□□□□□ -1.14
LIG3-202ENST00000378526 FOXK2Q01167 660 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 ACVR1Q04771 509 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 GSG1Q2KHT4 349 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 ABHD15Q6UXT9 468 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 LURAP1LQ8IV03 231 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 VGLL2Q8N8G2 317 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 OR5M1Q8NGP8 315 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 RTL8AQ9BWD3 113 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 MED20Q9H944 212 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 SLC5A6Q9Y289 635 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 SPCS1Q9Y6A9 102 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 MAGI3Q5TCQ9 1506 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 GP1BAP07359 652 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 PMP22Q01453 160 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 SEMG2Q02383 582 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 C22orf39Q6P5X5 142 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 TMEM230Q96A57 120 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 LPAR4Q99677 370 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 TMEM38BQ9NVV0 291 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 TINAGQ9UJW2 476 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 NDRG4Q9ULP0 352 aaKnown RBP7.93□□□□□ -1.14
LIG3-202ENST00000378526 MYADML2A6NDP7 307 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 CD14P08571 375 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 SDC1P18827 310 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 PRSS54Q6PEW0 395 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 RABEPKQ7Z6M1 372 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 MOGAT3Q86VF5 341 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 MARCH1Q8TCQ1 289 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 MUCL1Q96DR8 90 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 TMEM56Q96MV1 263 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 DCBLD2Q96PD2 775 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 RARRES2Q99969 163 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 C1QTNF3Q9BXJ4 246 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 CACNG5Q9UF02 275 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 BRWD1Q9NSI6 2320 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 SYNGR2O43760 224 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 PTP4A3O75365 173 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 FGF2P09038 288 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 NTSR1P30989 418 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 MMP16P51512 607 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 ISL1P61371 349 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 ELAVL1Q15717 326 aaKnown RBP7.93□□□□□ -1.14
LIG3-202ENST00000378526 SPRED3Q2MJR0 410 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 RNFT1Q5M7Z0 435 aa7.93□□□□□ -1.14
LIG3-202ENST00000378526 NUFIP2Q7Z417 695 aaKnown RBP7.93□□□□□ -1.14
LIG3-202ENST00000378526 BOD1Q96IK1 185 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms