RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 FOXL1Q12952 345 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 PPP1R8Q12972 351 aaKnown RBP4.41□□□□□ -1.7
PCDH9-201ENST00000377861 TMEM196Q5HYL7 178 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 NLGN4XQ8N0W4 816 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 NLGN4YQ8NFZ3 816 aaPredicted RBP4.41□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF891A8MT65 544 aaPredicted RBP4.41□□□□□ -1.7
PCDH9-201ENST00000377861 LILRB5O75023 590 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 CDX1P47902 265 aaPredicted RBP4.41□□□□□ -1.7
PCDH9-201ENST00000377861 TP53I3Q53FA7 332 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 VASNQ6EMK4 673 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 SULT1A1P50225 295 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 EMDP50402 254 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 SPCS3P61009 180 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 MYEOVQ96EZ4 313 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 PERPQ96FX8 193 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 LY96Q9Y6Y9 160 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 SCO1O75880 301 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 ULBP2Q9BZM5 246 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 ARL6IP6Q8N6S5 226 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 EID2BQ96D98 161 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 CRB3Q9BUF7 120 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 PECRQ9BY49 303 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 SERGEFQ9UGK8 458 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 DMRT1Q9Y5R6 373 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 IL2RGP31785 369 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 LSSP48449 732 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 GLIPR1L1Q6UWM5 242 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 NUDCD2Q8WVJ2 157 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 PDCD1LG2Q9BQ51 273 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 FBXO24O75426 580 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 GPX4P36969 197 aaPredicted RBP4.41□□□□□ -1.7
PCDH9-201ENST00000377861 TRIB1Q96RU8 372 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 TBX5Q99593 518 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 KCNMB2Q9Y691 235 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 OPN1LWP04000 364 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 OR10J1P30954 320 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 SMIM21Q3B7S5 101 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 SIGLECL1Q8N7X8 197 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.41□□□□□ -1.7
PCDH9-201ENST00000377861 FEZF1A0PJY2 475 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 OR2J2O76002 312 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 OR4N2Q8NGD1 307 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 SMAD5Q99717 465 aaKnown RBP4.41□□□□□ -1.7
PCDH9-201ENST00000377861 NAT8Q9UHE5 227 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF223Q9UK11 482 aaPredicted RBP4.41□□□□□ -1.7
PCDH9-201ENST00000377861 A0A1W2PP55 124 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 B4E171 279 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 GCH1P30793 250 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 PILRAQ9UKJ1 303 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 TCHHQ07283 1943 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 DEGS1O15121 323 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 PLATP00750 562 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 LINC00271P0C7V0 271 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 PPP1R13LQ8WUF5 828 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 PPP2CBP62714 309 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 PPP2CAP67775 309 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 CLN3Q13286 438 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 ALKAL2Q6UX46 152 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 DGAT2L6Q6ZPD8 337 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 OR11L1Q8NGX0 322 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF610Q8N9Z0 462 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 OR4C3Q8NH37 302 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 LMX1AQ8TE12 382 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 SLCO1C1Q9NYB5 712 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 ANXA10Q9UJ72 324 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 MPPED1O15442 326 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 MC5RP33032 325 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 CST9Q5W186 159 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF836Q6ZNA1 936 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 GPR119Q8TDV5 335 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 COPS9Q8WXC6 57 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF346Q9UL40 294 aaKnown RBP4.41□□□□□ -1.7
PCDH9-201ENST00000377861 MBTPS2O43462 519 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 RPS27LQ71UM5 84 aaKnown RBP4.41□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF547Q8IVP9 402 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 OR13C2Q8NGS9 318 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 TCTAP57738 103 aa4.41□□□□□ -1.7
PCDH9-201ENST00000377861 PSG6Q00889 435 aa4.4□□□□□ -1.7
PCDH9-201ENST00000377861 Q3ZCU0 254 aa4.4□□□□□ -1.7
PCDH9-201ENST00000377861 LAIR1Q6GTX8 287 aa4.4□□□□□ -1.7
PCDH9-201ENST00000377861 WDR61Q9GZS3 305 aaKnown RBP4.4□□□□□ -1.7
PCDH9-201ENST00000377861 MRPL15Q9P015 296 aaKnown RBP4.4□□□□□ -1.7
PCDH9-201ENST00000377861 PYCARD-AS1I3L0S3 204 aa4.4□□□□□ -1.7
PCDH9-201ENST00000377861 TERTO14746 1132 aaKnown RBP4.4□□□□□ -1.7
PCDH9-201ENST00000377861 ABOP16442 354 aa4.4□□□□□ -1.7
PCDH9-201ENST00000377861 PCNPQ8WW12 178 aaKnown RBP4.4□□□□□ -1.7
PCDH9-201ENST00000377861 NPIPB9F8W1W9 429 aa4.4□□□□□ -1.7
PCDH9-201ENST00000377861 LGALS7P47929 136 aa4.4□□□□□ -1.7
PCDH9-201ENST00000377861 CCDC74BQ96LY2 380 aa4.4□□□□□ -1.7
PCDH9-201ENST00000377861 CDH20Q9HBT6 801 aa4.4□□□□□ -1.7
PCDH9-201ENST00000377861 PSMD9O00233 223 aa4.4□□□□□ -1.7
PCDH9-201ENST00000377861 OR7C1O76099 320 aaPredicted RBP4.4□□□□□ -1.7
PCDH9-201ENST00000377861 GAMTQ14353 236 aa4.4□□□□□ -1.7
PCDH9-201ENST00000377861 TCTN1Q2MV58 587 aa4.4□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF331Q9NQX6 463 aaPredicted RBP4.4□□□□□ -1.7
PCDH9-201ENST00000377861 M0R135 149 aa4.4□□□□□ -1.7
PCDH9-201ENST00000377861 NKAIN4Q8IVV8 208 aa4.4□□□□□ -1.7
PCDH9-201ENST00000377861 TEX29Q8N6K0 151 aa4.4□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF799Q96GE5 643 aa4.4□□□□□ -1.7
PCDH9-201ENST00000377861 PBOV1Q9GZY1 135 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms