RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 RAP1BP61224 184 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 LCN6P62502 163 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 RAP1AP62834 184 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 ZNF239Q16600 458 aaKnown RBP10.83□□□□□ -0.68
VRK3-202ENST00000377011 MEP1BQ16820 701 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 PCGF3Q3KNV8 242 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 FBXL19-AS1Q494R0 122 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 GLT8D1Q68CQ7 371 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 DNM1P34Q6PK57 102 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.83□□□□□ -0.68
VRK3-202ENST00000377011 SLC38A6Q8IZM9 456 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 ZNF610Q8N9Z0 462 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 OR4C16Q8NGL9 310 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 PTX4Q96A99 478 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 PPA2Q9H2U2 334 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 BEX1Q9HBH7 125 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 GLS2Q9UI32 602 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 KCNG2Q9UJ96 466 aa10.83□□□□□ -0.68
VRK3-202ENST00000377011 TMED7-TICAM2A0A0A6YYA0 188 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 hCG_1807616A0A1W2PRN6 198 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 MCRIP1C9JLW8 97 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 TPD52L2O43399 206 aaKnown RBP10.82□□□□□ -0.68
VRK3-202ENST00000377011 OR6A2O95222 327 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 IL18BPO95998 194 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 ANXA7P20073 488 aaKnown RBP10.82□□□□□ -0.68
VRK3-202ENST00000377011 ZP3P21754 424 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 ADH6P28332 368 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 OPRM1P35372 400 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 EIF1P41567 113 aaKnown RBP10.82□□□□□ -0.68
VRK3-202ENST00000377011 POU3F4P49335 361 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 RIDAP52758 137 aaKnown RBP10.82□□□□□ -0.68
VRK3-202ENST00000377011 CARD18P57730 90 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 ACKR1Q16570 336 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 CHMP1BQ7LBR1 199 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 NUFIP2Q7Z417 695 aaKnown RBP10.82□□□□□ -0.68
VRK3-202ENST00000377011 CATSPERDQ86XM0 798 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 OR6M1Q8NGM8 313 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 GPX8Q8TED1 209 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 CCDC107Q8WV48 283 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 RNASE6Q93091 150 aaKnown RBP10.82□□□□□ -0.68
VRK3-202ENST00000377011 FAM3DQ96BQ1 224 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 OR5B2Q96R09 309 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 ZNF587Q96SQ5 575 aaPredicted RBP10.82□□□□□ -0.68
VRK3-202ENST00000377011 GINS4Q9BRT9 223 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 SFXN3Q9BWM7 321 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 RDH8Q9NYR8 311 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 ZNF224Q9NZL3 707 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 DHDHQ9UQ10 334 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 TMED7Q9Y3B3 224 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 ZNF175Q9Y473 711 aa10.82□□□□□ -0.68
VRK3-202ENST00000377011 ROS1P08922 2347 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 SLC22A23A1A5C7 686 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 KRBOX1C9JBD0 128 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 SMAD9O15198 467 aaKnown RBP10.81□□□□□ -0.68
VRK3-202ENST00000377011 AHSA1O95433 338 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 CFDP00746 253 aaPredicted RBP10.81□□□□□ -0.68
VRK3-202ENST00000377011 ISG15P05161 165 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 IGFBP3P17936 291 aaPredicted RBP10.81□□□□□ -0.68
VRK3-202ENST00000377011 ACHEP22303 614 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 PRKACBP22694 351 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 NTF4P34130 210 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 TAS2R19P59542 299 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 GMFBP60983 142 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 TLE4Q04727 773 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 ZP4Q12836 540 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 C1orf140Q5VVS0 124 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 TMEM65Q6PI78 240 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 DEGS2Q6QHC5 323 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 TMEM229BQ8NBD8 167 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 OR51D1Q8NGF3 324 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 OR10AC1Q8NH08 325 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 OR52N5Q8NH56 324 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 TMEM234Q8WY98 164 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 ST8SIA1Q92185 356 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 SLC25A21Q9BQT8 299 aaPredicted RBP10.81□□□□□ -0.68
VRK3-202ENST00000377011 RBM24Q9BX46 236 aaKnown RBP10.81□□□□□ -0.68
VRK3-202ENST00000377011 POTEKPQ9BYX7 375 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 LIME1Q9H400 295 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 C1orf198Q9H425 327 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 CA10Q9NS85 328 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 MRPL22Q9NWU5 206 aaKnown RBP10.81□□□□□ -0.68
VRK3-202ENST00000377011 OPN4Q9UHM6 478 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 TEP1Q99973 2627 aaKnown RBP10.81□□□□□ -0.68
VRK3-202ENST00000377011 A0A1W2PPR1 153 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 PLPP3O14495 311 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 WNT11O96014 354 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 HLA-DQA2P01906 255 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 LPLP06858 475 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 ITGA5P08648 1049 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 ZNF250P15622 560 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 S100A11P31949 105 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 SEC61A1P61619 476 aaKnown RBP10.81□□□□□ -0.68
VRK3-202ENST00000377011 GLO1Q04760 184 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 TSC22D1Q15714 1073 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 PCK2Q16822 640 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 C2orf76Q3KRA6 126 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 TMEM225Q6GV28 225 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 TUSC5Q8IXB3 177 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 NKAIN3Q8N8D7 197 aa10.81□□□□□ -0.68
VRK3-202ENST00000377011 OR2AK2Q8NG84 335 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms