RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 KISS1Q15726 138 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 LY6G6FQ5SQ64 297 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ZNF529Q6P280 563 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 MISPQ8IVT2 679 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 RSRP1Q9BUV0 290 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 AKIRIN1Q9H9L7 192 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SPACA1Q9HBV2 294 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SHANK1Q9Y566 2161 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 H3BP45 60 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 RAD51DO75771 328 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 HPP00738 406 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ITGB2P05107 769 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 TUBG1P23258 451 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 HTR5AP47898 357 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 NPBWR1P48145 328 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SNRPEP62304 92 aaKnown RBP12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 MOB3CQ70IA8 216 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SLC16A13Q7RTY0 426 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 KCNJ16Q9NPI9 418 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 NPTNQ9Y639 398 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 NME1P15531 152 aaKnown RBP12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 RPL12P30050 165 aaKnown RBP12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ZNF84P51523 738 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 RPS18P62269 152 aaKnown RBP12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 JMJD6Q6NYC1 403 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 DRAM2Q6UX65 266 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SGK3Q96BR1 496 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 FLVCR1Q9Y5Y0 555 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 BORCS7-ASMTA0A0B4J1R7 106 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 LMO7DNF2Z398 122 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 RPS10P46783 165 aaKnown RBP12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 GNMTQ14749 295 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 LRRC75AQ8NAA5 344 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SGCZQ96LD1 299 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 GPX7Q96SL4 187 aaPredicted RBP12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 EXOSC3Q9NQT5 275 aaKnown RBP12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SCGNO76038 276 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ARG1P05089 322 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 HIST1H1DP16402 221 aaKnown RBP12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 MPGP29372 298 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 UNC119Q13432 240 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 AVPI1Q5T686 147 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 OR2A2Q6IF42 318 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 LPCAT3Q6P1A2 487 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 UCN2Q96RP3 112 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 BLACEA4D250 179 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CHRM2P08172 466 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 OR5H8P0DN80 308 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 B4GALT1P15291 398 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 APOBEC1P41238 236 aaKnown RBP12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ISXQ2M1V0 245 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 TMEM182Q6ZP80 229 aaPredicted RBP12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 PPP1R3BQ86XI6 285 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 OR5AP2Q8NGF4 316 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ADIPOR1Q96A54 375 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ADAM19Q9H013 955 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ZNF576Q9H609 170 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 FN3KRPQ9HA64 309 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 NIT2Q9NQR4 276 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 BIN3Q9NQY0 253 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 FER1L5A0AVI2 2057 aa12.74□□□□□ -0.37
TNFRSF1B-201ENST00000376259 IGHV1OR15-9A0A0B4J2B8 117 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 MS4A18H0YCH9 400 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 EFSO43281 561 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SNAPC5O75971 98 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 FGF2P09038 288 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 PIGPP57054 158 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 DCDP81605 110 aaKnown RBP12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 MS4A18Q3C1V0 323 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 PLCXD3Q63HM9 321 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 GPR137CQ8N3F9 429 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ASB10Q8WXI3 467 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SHARPINQ9H0F6 387 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 C9J4A7 227 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 M0R135 149 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CDC14BO60729 498 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 DUS4LO95620 317 aaKnown RBP12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SFTA3P0C7M3 94 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SLC25A42Q86VD7 318 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 STX12Q86Y82 276 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ZNF799Q96GE5 643 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 OR10C1Q96KK4 312 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 MRPS17Q9Y2R5 130 aaKnown RBP12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 A0A096LPE4 126 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 A0A1W2PPZ6 126 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SIGLEC6O43699 453 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 EIF3GO75821 320 aaKnown RBP eCLIP12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ZNF260Q3ZCT1 412 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ZNF684Q5T5D7 378 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 GUSBP11Q6P575 273 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 C1QL2Q7Z5L3 287 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 C12orf10Q9HB07 376 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 PADI1Q9ULC6 663 aa12.73□□□□□ -0.37
TNFRSF1B-201ENST00000376259 TUBAL3A6NHL2 446 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ACTL6AO96019 429 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 HOXC4P09017 264 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ZNF44P15621 663 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 MITD1Q8WV92 249 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 REG4Q9BYZ8 158 aa12.72□□□□□ -0.37
TNFRSF1B-201ENST00000376259 WBP1LQ9NX94 342 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms