RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 C4BP0C0L5 1744 aa12.33□□□□□ -0.44
COL4A1-201ENST00000375820 C5P01031 1676 aa12.33□□□□□ -0.44
COL4A1-201ENST00000375820 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.33□□□□□ -0.44
COL4A1-201ENST00000375820 ABHD14AQ9BUJ0 271 aa12.33□□□□□ -0.44
COL4A1-201ENST00000375820 TCRBV5S1A1TA0A578 114 aa12.33□□□□□ -0.44
COL4A1-201ENST00000375820 PYCARD-AS1I3L0S3 204 aa12.33□□□□□ -0.44
COL4A1-201ENST00000375820 PLRG1O43660 514 aaKnown RBP12.33□□□□□ -0.44
COL4A1-201ENST00000375820 NDUFB3O43676 98 aa12.33□□□□□ -0.44
COL4A1-201ENST00000375820 ZNF205O95201 554 aa12.33□□□□□ -0.44
COL4A1-201ENST00000375820 CNN1P51911 297 aaKnown RBP12.33□□□□□ -0.44
COL4A1-201ENST00000375820 RAB1AP62820 205 aa12.33□□□□□ -0.44
COL4A1-201ENST00000375820 FAM3AP98173 230 aa12.33□□□□□ -0.44
COL4A1-201ENST00000375820 LRP11Q86VZ4 500 aa12.33□□□□□ -0.44
COL4A1-201ENST00000375820 TMEM30AQ9NV96 361 aa12.33□□□□□ -0.44
COL4A1-201ENST00000375820 C3orf80F5H4A9 247 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 SLC37A1P57057 533 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 OR2V1Q8NHB1 315 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 C10orf90Q96M02 699 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 OCEL1Q9H607 264 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 PARD6AQ9NPB6 346 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 ASIC5Q9NY37 505 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 B9D1Q9UPM9 204 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 LRRC3CA6NJW4 275 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 SPEM2Q0P670 501 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 SMIM21Q3B7S5 101 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 LRRC10Q5BKY1 277 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 LYG1Q8N1E2 194 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 OR2G2Q8NGZ5 317 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 GABARAPL3Q9BY60 117 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 H0YIG0 161 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 MKRN2OSH3BPM6 223 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 PATE4P0C8F1 98 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 POU3F3P20264 500 aaPredicted RBP12.32□□□□□ -0.44
COL4A1-201ENST00000375820 SLC6A12P48065 614 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 HLA-BQ31612 363 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 GTF2H5Q6ZYL4 71 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 FA2HQ7L5A8 372 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 PLPP6Q8IY26 295 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 NUDT9Q9BW91 350 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 TRAPPC1Q9Y5R8 145 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 RGPD5Q99666 1765 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 SFTA3P0C7M3 94 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 APELAP0DMC3 54 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 OR3A4PP47883 348 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 NOVA1P51513 510 aaKnown RBP12.32□□□□□ -0.44
COL4A1-201ENST00000375820 FGF8P55075 233 aaPredicted RBP12.32□□□□□ -0.44
COL4A1-201ENST00000375820 RHOBP62745 196 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 OR2I1PQ8NGU4 316 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 EXTL1Q92935 676 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 POM121L2Q96KW2 1035 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 SLC25A22Q9H936 323 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 CLEC1BQ9P126 229 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 TCRBV5S2A0A599 114 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 NUDT19A8MXV4 375 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 HPP00738 406 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 SLC25A5P05141 298 aaKnown RBP12.32□□□□□ -0.44
COL4A1-201ENST00000375820 HNRNPA3P51991 378 aaKnown RBP12.32□□□□□ -0.44
COL4A1-201ENST00000375820 FZD2Q14332 565 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 FFAR4Q5NUL3 377 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 MRGPREQ86SM8 312 aa12.32□□□□□ -0.44
COL4A1-201ENST00000375820 CNRIP1Q96F85 164 aaPredicted RBP12.32□□□□□ -0.44
COL4A1-201ENST00000375820 PRRC2BQ5JSZ5 2229 aaKnown RBP12.32□□□□□ -0.44
COL4A1-201ENST00000375820 CCDC187A0A096LP49 1063 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 A0A1B0GTH9 108 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 FRG2CA6NGY1 282 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 TGOLN2O43493 480 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 TRAPPC2P0DI81 140 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 TRAPPC2BP0DI82 140 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 DHRS13Q6UX07 377 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 ANKRD53Q8N9V6 530 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 LRRC61Q9BV99 259 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 PDFQ9HBH1 243 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 DHHO43323 396 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 MMP7P09237 267 aaPredicted RBP12.31□□□□□ -0.44
COL4A1-201ENST00000375820 ATF1P18846 271 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 RPS4XP62701 263 aaKnown RBP12.31□□□□□ -0.44
COL4A1-201ENST00000375820 DGAT2L6Q6ZPD8 337 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 TMEM37Q8WXS4 190 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 MRGPRX4Q96LA9 322 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 CMTM3Q96MX0 182 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 PRR13Q9NZ81 148 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 PSG11Q9UQ72 335 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 LYZL6O75951 148 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 CEACAM5P06731 702 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 COL19A1Q14993 1142 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 C9orf50Q5SZB4 431 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 GUSBP11Q6P575 273 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 TGIF2LYQ8IUE0 185 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 FBXL14Q8N1E6 418 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 C12orf57Q99622 126 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 FOXB1Q99853 325 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 KCNK15Q9H427 330 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 A0A1W2PPC4 97 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 ADAM20O43506 726 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 TMEM196Q5HYL7 178 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 ST8SIA1Q92185 356 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 SLC38A6Q8IZM9 456 aa12.31□□□□□ -0.44
COL4A1-201ENST00000375820 PRSS44E7EML9 344 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 EVX1P49640 407 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 CLDN20P56880 219 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms