RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ZNF585AQ6P3V2 769 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 Q7L0L9 218 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 LHFPL1Q86WI0 220 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 BHLHE23Q8NDY6 225 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 MAFIPQ8WZ33 124 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 SPACA9Q96E40 222 aaPredicted RBP12.8□□□□□ -0.36
MSH5-201ENST00000375703 OR10C1Q96KK4 312 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 LYZL4Q96KX0 146 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 SPSB2Q99619 263 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 EHFQ9NZC4 300 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 GHRLQ9UBU3 117 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 LOC102725191A0A1B0GVB3 256 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 MSGN1A6NI15 193 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 STMND1H3BQB6 276 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 GPR31O00270 319 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 PRF1P14222 555 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 CTSSP25774 331 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 TAS2R46P59540 309 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 PRAMEF20Q5VT98 475 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 SVBPQ8N300 66 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 ARL11Q969Q4 196 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 PURGQ9UJV8 347 aaKnown RBP12.8□□□□□ -0.36
MSH5-201ENST00000375703 OSGIN2Q9Y236 505 aa12.8□□□□□ -0.36
MSH5-201ENST00000375703 RALGAPA1Q6GYQ0 2036 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 SERPINA2P20848 420 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 FKBP2P26885 142 aaKnown RBP12.79□□□□□ -0.36
MSH5-201ENST00000375703 ADH6P28332 368 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 SLC6A9P48067 706 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 LSM6P62312 80 aaKnown RBP12.79□□□□□ -0.36
MSH5-201ENST00000375703 SHBQ15464 509 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 ZNF239Q16600 458 aaKnown RBP12.79□□□□□ -0.36
MSH5-201ENST00000375703 C2orf50Q96LR7 162 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 S100A13Q99584 98 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 PECRQ9BY49 303 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 SLC26A1Q9H2B4 701 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 GSKIPQ9P0R6 139 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 ZNF629Q9UEG4 869 aaPredicted RBP12.79□□□□□ -0.36
MSH5-201ENST00000375703 C19orf25Q9UFG5 118 aaPredicted RBP12.79□□□□□ -0.36
MSH5-201ENST00000375703 ACTL6AO96019 429 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 FCGR2AP12318 317 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 LYL1P12980 280 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 RAB32Q13637 225 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 GUSBP11Q6P575 273 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 PUSL1Q8N0Z8 303 aaKnown RBP12.79□□□□□ -0.36
MSH5-201ENST00000375703 FADS6Q8N9I5 356 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 GJC3Q8NFK1 279 aa12.79□□□□□ -0.36
MSH5-201ENST00000375703 LILRB1Q8NHL6 650 aaPredicted RBP12.79□□□□□ -0.36
MSH5-201ENST00000375703 HOXB5P09067 269 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 FAM157CP0CG43 387 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 CCL7P80098 99 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 UBE2V2Q15819 145 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 GUCA2BQ16661 112 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 CHRFAM7AQ494W8 412 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 ZNF385CQ66K41 422 aaPredicted RBP12.78□□□□□ -0.36
MSH5-201ENST00000375703 CNTNAP3BQ96NU0 1288 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 ELL3Q9HB65 397 aaPredicted RBP12.78□□□□□ -0.36
MSH5-201ENST00000375703 OR2S2Q9NQN1 319 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.78□□□□□ -0.36
MSH5-201ENST00000375703 A0A1W2PQM1 296 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 NUDT19A8MXV4 375 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 F8W036 122 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 MSR1P21757 451 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 THBS4P35443 961 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 ALDH3B1P43353 468 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 CSNK1A1P48729 337 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 BLOC1S1P78537 153 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 SRSF3P84103 164 aaKnown RBP12.78□□□□□ -0.36
MSH5-201ENST00000375703 PLEKHN1Q494U1 663 aaPredicted RBP12.78□□□□□ -0.36
MSH5-201ENST00000375703 CRIP3Q6Q6R5 217 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 LRRC18Q8N456 261 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 EMG1Q92979 244 aaKnown RBP12.78□□□□□ -0.36
MSH5-201ENST00000375703 WNT2BQ93097 391 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 AQP10Q96PS8 301 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 AKIRIN1Q9H9L7 192 aaPredicted RBP12.78□□□□□ -0.36
MSH5-201ENST00000375703 CABIN1Q9Y6J0 2220 aa12.78□□□□□ -0.36
MSH5-201ENST00000375703 IGHV5-10-1A0A0J9YXX1 117 aa12.77□□□□□ -0.36
MSH5-201ENST00000375703 OR5H15A6NDH6 313 aa12.77□□□□□ -0.36
MSH5-201ENST00000375703 FIGNL2A6NMB9 653 aa12.77□□□□□ -0.36
MSH5-201ENST00000375703 FOXI3A8MTJ6 420 aaPredicted RBP12.77□□□□□ -0.36
MSH5-201ENST00000375703 ZNF705EA8MWA4 302 aaPredicted RBP12.77□□□□□ -0.36
MSH5-201ENST00000375703 TP53I11O14683 189 aa12.77□□□□□ -0.36
MSH5-201ENST00000375703 SIGLEC6O43699 453 aa12.77□□□□□ -0.36
MSH5-201ENST00000375703 DKK1O94907 266 aa12.77□□□□□ -0.36
MSH5-201ENST00000375703 KNG1P01042 644 aa12.77□□□□□ -0.36
MSH5-201ENST00000375703 IGLV3-1P01715 115 aa12.77□□□□□ -0.36
MSH5-201ENST00000375703 HPNP05981 417 aa12.77□□□□□ -0.36
MSH5-201ENST00000375703 NR2C1P13056 603 aa12.77□□□□□ -0.36
MSH5-201ENST00000375703 FAHP16930 419 aa12.77□□□□□ -0.36
MSH5-201ENST00000375703 ADCYAP1P18509 176 aa12.77□□□□□ -0.36
MSH5-201ENST00000375703 DRAM2Q6UX65 266 aa12.77□□□□□ -0.36
MSH5-201ENST00000375703 FAM219AQ8IW50 185 aa12.77□□□□□ -0.36
MSH5-201ENST00000375703 NELFAQ9H3P2 528 aa12.77□□□□□ -0.36
MSH5-201ENST00000375703 TREM1Q9NP99 234 aa12.77□□□□□ -0.36
MSH5-201ENST00000375703 CHCHD2Q9Y6H1 151 aaPredicted RBP12.77□□□□□ -0.36
MSH5-201ENST00000375703 DHRS3O75911 302 aa12.77□□□□□ -0.37
MSH5-201ENST00000375703 CSTBP04080 98 aaKnown RBP12.77□□□□□ -0.37
MSH5-201ENST00000375703 PET100P0DJ07 73 aa12.77□□□□□ -0.37
MSH5-201ENST00000375703 RPS2P15880 293 aaKnown RBP12.77□□□□□ -0.37
MSH5-201ENST00000375703 SCRN3Q0VDG4 424 aa12.77□□□□□ -0.37
MSH5-201ENST00000375703 EIF3IQ13347 325 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms