RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 TEX22C9J3V5 150 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 OR7A17O14581 309 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 PTGESO14684 152 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 APODP05090 189 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 ISG15P05161 165 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 ZNF84P51523 738 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 NCS1P62166 190 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 ZNF284Q2VY69 593 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 MBOAT2Q6ZWT7 520 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 P2RY8Q86VZ1 359 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 OR10Q1Q8NGQ4 319 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 GPR146Q96CH1 333 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 FAIM2Q9BWQ8 316 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 RNF39Q9H2S5 420 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 ZBTB20Q9HC78 741 aaPredicted RBP6.99□□□□□ -1.29
USP48-203ENST00000374732 CLN8Q9UBY8 286 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 CMAHPQ9Y471 501 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 TINCRA0A1B0GVN0 87 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 PPP5D1E7EU14 171 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 HMGB3O15347 200 aaKnown RBP6.99□□□□□ -1.29
USP48-203ENST00000374732 TPST2O60704 377 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 SNAPC5O75971 98 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 TMEM50AO95807 157 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 P04436 131 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 MRPS6P82932 125 aaKnown RBP6.99□□□□□ -1.29
USP48-203ENST00000374732 ACSM2AQ08AH3 577 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 PSG5Q15238 335 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 HECTD2Q5U5R9 776 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 ACSM2BQ68CK6 577 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 TXNDC8Q6A555 127 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 TMPRSS11AQ6ZMR5 421 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 ZNF534Q76KX8 674 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 ANKRD33Q7Z3H0 272 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 DEFB106AQ8N104 65 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 OR56A4Q8NGH8 313 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 CLEC4CQ8WTT0 213 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 FGGYQ96C11 551 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 C10orf35Q96D05 121 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 WDR92Q96MX6 357 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 MANSC1Q9H8J5 431 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 PLAC1Q9HBJ0 212 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 IL17CQ9P0M4 197 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 CDC42EP3Q9UKI2 254 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 PPIAL4AQ9Y536 164 aa6.99□□□□□ -1.29
USP48-203ENST00000374732 SPIN1Q9Y657 262 aaPredicted RBP6.99□□□□□ -1.29
USP48-203ENST00000374732 A0A087WUJ7 227 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 PRAMEF33A0A0G2JMD5 474 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 TMEM269A0A1B0GVZ9 245 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 FOXI3A8MTJ6 420 aaPredicted RBP6.98□□□□□ -1.29
USP48-203ENST00000374732 RPL36A-HNRNPH2H7BZ11 118 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 SULT2B1O00204 365 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 TNFSF11O14788 317 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 FOXH1O75593 365 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 CTSLP07711 333 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 CTSBP07858 339 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 SOD3P08294 240 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 NRN1LQ496H8 165 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 CLEC12AQ5QGZ9 265 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 GFI1BQ5VTD9 330 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 GGNBP1Q5YKI7 109 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 CLEC20AQ6ZU45 233 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 Q6ZVH6 145 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 SIAH3Q8IW03 269 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 SLC35G3Q8N808 338 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 OR10G4Q8NGN3 311 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 UCN3Q969E3 161 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 TBC1D17Q9HA65 648 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 DCAF13Q9NV06 445 aaKnown RBP6.98□□□□□ -1.29
USP48-203ENST00000374732 A0A087WX48 190 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 GAGE12BA1L429 117 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 RNASET2O00584 256 aaKnown RBP6.98□□□□□ -1.29
USP48-203ENST00000374732 DEGS1O15121 323 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 KLF8O95600 359 aaPredicted RBP6.98□□□□□ -1.29
USP48-203ENST00000374732 LAMP1P11279 417 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 ADCYAP1P18509 176 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 NUMBP49757 651 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 AQP5P55064 265 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 OR10A3P58181 314 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 PITX1P78337 314 aaPredicted RBP6.98□□□□□ -1.29
USP48-203ENST00000374732 RAE1P78406 368 aaKnown RBP6.98□□□□□ -1.29
USP48-203ENST00000374732 HOXC5Q00444 222 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 PLP2Q04941 152 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 ADIGQ0VDE8 80 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 C1orf194Q5T5A4 169 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 FRRS1Q6ZNA5 592 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 NOXO1Q8NFA2 376 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 APOBEC3DQ96AK3 386 aaPredicted RBP6.98□□□□□ -1.29
USP48-203ENST00000374732 KCTD7Q96MP8 289 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 UHRF2Q96PU4 802 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 EFCAB11Q9BUY7 163 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 ZNF629Q9UEG4 869 aaPredicted RBP6.98□□□□□ -1.29
USP48-203ENST00000374732 A0A0D9SG52 128 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 OR12D1P0DN82 309 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 SLC2A2P11168 524 aaPredicted RBP6.98□□□□□ -1.29
USP48-203ENST00000374732 COX7A2P14406 83 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 BMP5P22003 454 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 PRTN3P24158 256 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 AGTR1P30556 359 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 KIR2DL3P43628 341 aa6.98□□□□□ -1.29
USP48-203ENST00000374732 KIR2DS4P43632 304 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms