RNA–Protein interactions for RNA: ENST00000374610.6

PFDN6-203, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-203ENST00000374610 ISPDA4D126 451 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 TRIM64A6NGJ6 449 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 TRIM64BA6NI03 449 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 OR4C45A6NMZ5 311 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 IFNL4K9M1U5 179 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 SMAD7O15105 426 aaKnown RBP12.9□□□□□ -0.34
PFDN6-203ENST00000374610 GATBO75879 557 aaKnown RBP12.9□□□□□ -0.34
PFDN6-203ENST00000374610 ZFPL1O95159 310 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 SPHARQ15513 63 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 PRAMEF6Q5VXH4 476 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 TGIF2LYQ8IUE0 185 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 C1orf87Q8N0U7 546 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 SVOPQ8N4V2 548 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 ZFP41Q8N8Y5 198 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 ZNF420Q8TAQ5 688 aaPredicted RBP12.9□□□□□ -0.34
PFDN6-203ENST00000374610 ERGIC1Q969X5 290 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 FGGYQ96C11 551 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 C10orf35Q96D05 121 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 SMIM19Q96E16 107 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 NEK6Q9HC98 313 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 GCM1Q9NP62 436 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 TMEM106BQ9NUM4 274 aa12.9□□□□□ -0.34
PFDN6-203ENST00000374610 IGHV4-30-2A0A087WSY4 118 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 ANKRD61A6NGH8 418 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 ZNF732B4DXR9 585 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 RNF223E7ERA6 249 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 CD2P06729 351 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 CELP19835 753 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 GPM6AP51674 278 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 MAB21L1Q13394 359 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 CNN3Q15417 329 aaKnown RBP12.89□□□□□ -0.35
PFDN6-203ENST00000374610 CEACAM21Q3KPI0 293 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 SPRNQ5BIV9 151 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 XAF1Q6GPH4 301 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 OR5A2Q8NGI9 324 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 GPR148Q8TDV2 347 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 PP6455Q8WZ26 134 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 OR5P3Q8WZ94 311 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 RNF166Q96A37 237 aaPredicted RBP12.89□□□□□ -0.35
PFDN6-203ENST00000374610 TECTBQ96PL2 329 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 REG4Q9BYZ8 158 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 BPESC1Q9GZL8 116 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 C1orf123Q9NWV4 160 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 ZNF281Q9Y2X9 895 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 CACNG2Q9Y698 323 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 CSMD2Q7Z408 3487 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 TACC2O95359 2948 aa12.89□□□□□ -0.35
PFDN6-203ENST00000374610 USF3Q68DE3 2245 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 A0A1B0GWJ7 208 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 FAM230AA0A1W2PPH8 454 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 TMEM210A6NLX4 147 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 OGG1O15527 345 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 LMX1BO60663 402 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 MRPS14O60783 128 aaKnown RBP12.88□□□□□ -0.35
PFDN6-203ENST00000374610 HEXAP06865 529 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 NR4A2P43354 598 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 SOX2P48431 317 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 GNG3P63215 75 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 BDH1Q02338 343 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 DMRTC1Q5HYR2 192 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 AVPI1Q5T686 147 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 SPNS3Q6ZMD2 512 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 KRTAP1-3Q8IUG1 177 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 BOLLQ8N9W6 283 aaKnown RBP12.88□□□□□ -0.35
PFDN6-203ENST00000374610 OR1M1Q8NGA1 313 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 OR51A4Q8NGJ6 313 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 OR5D14Q8NGL3 314 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 TRMT10AQ8TBZ6 339 aaKnown RBP12.88□□□□□ -0.35
PFDN6-203ENST00000374610 NPRL2Q8WTW4 380 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 GHSRQ92847 366 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 UFD1Q92890 307 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 ITPKCQ96DU7 683 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 NARFLQ9H6Q4 476 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 PPP1R3EQ9H7J1 279 aa12.88□□□□□ -0.35
PFDN6-203ENST00000374610 PDZD2O15018 2839 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 LOC100289279A0A1B0GTE1 492 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 OR5B21A6NL26 309 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 H7C1Q1 480 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 CYB5R3P00387 301 aaPredicted RBP12.87□□□□□ -0.35
PFDN6-203ENST00000374610 LALBAP00709 142 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 CD99P14209 185 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 USF1P22415 310 aaPredicted RBP12.87□□□□□ -0.35
PFDN6-203ENST00000374610 GIFP27352 417 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 GATA4P43694 442 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 MAP2K4P45985 399 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 MPPED2Q15777 294 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 YIF1BQ5BJH7 314 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 SERPINA12Q8IW75 414 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 OR10AC1Q8NH08 325 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 BORCS8Q96FH0 119 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 OR5M11Q96RB7 305 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 CHST5Q9GZS9 411 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 RNF7Q9UBF6 113 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 PCDHB10Q9UN67 800 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 LRRC42Q9Y546 428 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 NPTNQ9Y639 398 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 SIRT4Q9Y6E7 314 aaPredicted RBP12.87□□□□□ -0.35
PFDN6-203ENST00000374610 SETXQ7Z333 2677 aaKnown RBP12.87□□□□□ -0.35
PFDN6-203ENST00000374610 ITPR2Q14571 2701 aa12.87□□□□□ -0.35
PFDN6-203ENST00000374610 SPG11Q96JI7 2443 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms