RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 hCG_38984A0A1B0GV85 526 aa21.72■■□□□ 1.07
CTSA-203ENST00000372459 SS18L1O75177 396 aaPredicted RBP21.72■■□□□ 1.07
CTSA-203ENST00000372459 OR3A2P47893 321 aa21.72■■□□□ 1.07
CTSA-203ENST00000372459 CDNFQ49AH0 187 aa21.72■■□□□ 1.07
CTSA-203ENST00000372459 CRIP3Q6Q6R5 217 aa21.72■■□□□ 1.07
CTSA-203ENST00000372459 TMEM229BQ8NBD8 167 aa21.72■■□□□ 1.07
CTSA-203ENST00000372459 TMEM104Q8NE00 496 aa21.72■■□□□ 1.07
CTSA-203ENST00000372459 PIGTQ969N2 578 aa21.72■■□□□ 1.07
CTSA-203ENST00000372459 CMBLQ96DG6 245 aa21.72■■□□□ 1.07
CTSA-203ENST00000372459 CST11Q9H112 138 aa21.72■■□□□ 1.07
CTSA-203ENST00000372459 OR10A4Q9H209 315 aa21.72■■□□□ 1.07
CTSA-203ENST00000372459 NOX3Q9HBY0 568 aa21.72■■□□□ 1.07
CTSA-203ENST00000372459 ZNF107Q9UII5 783 aaPredicted RBP21.72■■□□□ 1.07
CTSA-203ENST00000372459 WIPF3A6NGB9 483 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 CRTAPO75718 401 aaPredicted RBP21.71■■□□□ 1.07
CTSA-203ENST00000372459 MELTFP08582 738 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 SULT1A3P0DMM9 295 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 SULT1A4P0DMN0 295 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 EDN3P14138 238 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 FAM3AP98173 230 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 ZNF92Q03936 586 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 ZNF169Q14929 603 aaPredicted RBP21.71■■□□□ 1.07
CTSA-203ENST00000372459 CNN3Q15417 329 aaKnown RBP21.71■■□□□ 1.07
CTSA-203ENST00000372459 STEAP1BQ6NZ63 245 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 IGFL3Q6UXB1 125 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 COLCA1Q6ZS62 124 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 DPPA2Q7Z7J5 298 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 GABRG1Q8N1C3 465 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 OR5D18Q8NGL1 313 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 ZNF431Q8TF32 576 aaPredicted RBP21.71■■□□□ 1.07
CTSA-203ENST00000372459 SARAFQ96BY9 339 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 S100A13Q99584 98 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 URM1Q9BTM9 101 aaKnown RBP21.71■■□□□ 1.07
CTSA-203ENST00000372459 ELF5Q9UKW6 265 aaPredicted RBP21.71■■□□□ 1.07
CTSA-203ENST00000372459 FLVCR2Q9UPI3 526 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 GVINP1Q7Z2Y8 2422 aa21.71■■□□□ 1.07
CTSA-203ENST00000372459 LOC100509620A0A075B734 347 aa21.7■■□□□ 1.07
CTSA-203ENST00000372459 PRAF2O60831 178 aa21.7■■□□□ 1.07
CTSA-203ENST00000372459 NDUFB6O95139 128 aa21.7■■□□□ 1.07
CTSA-203ENST00000372459 CD3DP04234 171 aa21.7■■□□□ 1.07
CTSA-203ENST00000372459 NAT2P11245 290 aa21.7■■□□□ 1.07
CTSA-203ENST00000372459 RAB1AP62820 205 aa21.7■■□□□ 1.07
CTSA-203ENST00000372459 CLVS2Q5SYC1 327 aa21.7■■□□□ 1.07
CTSA-203ENST00000372459 OR8S1Q8NH09 359 aa21.7■■□□□ 1.07
CTSA-203ENST00000372459 TNFAIP8L1Q8WVP5 186 aa21.7■■□□□ 1.07
CTSA-203ENST00000372459 SPSB4Q96A44 273 aa21.7■■□□□ 1.07
CTSA-203ENST00000372459 CPNE2Q96FN4 548 aaPredicted RBP21.7■■□□□ 1.07
CTSA-203ENST00000372459 NICN1Q9BSH3 213 aa21.7■■□□□ 1.07
CTSA-203ENST00000372459 BANF2Q9H503 90 aa21.7■■□□□ 1.07
CTSA-203ENST00000372459 ASPMQ8IZT6 3477 aa21.7■■□□□ 1.06
CTSA-203ENST00000372459 MEIKINA0A087WXM9 373 aa21.7■■□□□ 1.06
CTSA-203ENST00000372459 ZNF503-AS2A6NEH8 195 aa21.7■■□□□ 1.06
CTSA-203ENST00000372459 CYB5AP00167 134 aa21.7■■□□□ 1.06
CTSA-203ENST00000372459 PRKACBP22694 351 aa21.7■■□□□ 1.06
CTSA-203ENST00000372459 SLC22A6Q4U2R8 563 aa21.7■■□□□ 1.06
CTSA-203ENST00000372459 OR1K1Q8NGR3 316 aa21.7■■□□□ 1.06
CTSA-203ENST00000372459 TRIB1Q96RU8 372 aa21.7■■□□□ 1.06
CTSA-203ENST00000372459 SELENOIQ9C0D9 397 aa21.7■■□□□ 1.06
CTSA-203ENST00000372459 ARPC1BO15143 372 aaKnown RBP21.69■■□□□ 1.06
CTSA-203ENST00000372459 IL18BPO95998 194 aa21.69■■□□□ 1.06
CTSA-203ENST00000372459 SDHBP21912 280 aa21.69■■□□□ 1.06
CTSA-203ENST00000372459 CCNOP22674 350 aa21.69■■□□□ 1.06
CTSA-203ENST00000372459 PLP2Q04941 152 aa21.69■■□□□ 1.06
CTSA-203ENST00000372459 OR8B8Q15620 311 aa21.69■■□□□ 1.06
CTSA-203ENST00000372459 ST3GAL2Q16842 350 aa21.69■■□□□ 1.06
CTSA-203ENST00000372459 OR4D10Q8NGI6 311 aa21.69■■□□□ 1.06
CTSA-203ENST00000372459 DACT3Q96B18 629 aaPredicted RBP21.69■■□□□ 1.06
CTSA-203ENST00000372459 MGAT4AQ9UM21 535 aa21.69■■□□□ 1.06
CTSA-203ENST00000372459 C5orf49A4QMS7 147 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 ICMTO60725 284 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 FCER2P06734 321 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 GNB3P16520 340 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 RBMS2Q15434 407 aaKnown RBP21.68■■□□□ 1.06
CTSA-203ENST00000372459 TMEM42Q69YG0 159 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 FJX1Q86VR8 437 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 ZNF584Q8IVC4 421 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 OR56B1Q8NGI3 324 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 SLC23A1Q9UHI7 598 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 KLK13Q9UKR3 277 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 A0A0A6YYD4 124 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 A0A1W2PP11 408 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 NRASP01111 189 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 CXCL3P19876 107 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 MTCP1P56278 107 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 C1QL2Q7Z5L3 287 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 TRAPPC6BQ86SZ2 158 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 NANOS1Q8WY41 292 aaKnown RBP21.68■■□□□ 1.06
CTSA-203ENST00000372459 DVL3Q92997 716 aaPredicted RBP21.68■■□□□ 1.06
CTSA-203ENST00000372459 PLSCR2Q9NRY7 297 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 NPTNQ9Y639 398 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 ZFHX4Q86UP3 3567 aa21.68■■□□□ 1.06
CTSA-203ENST00000372459 TNRC6AQ8NDV7 1962 aaKnown RBP21.68■■□□□ 1.06
CTSA-203ENST00000372459 FAM186AA6NE01 2351 aa21.67■■□□□ 1.06
CTSA-203ENST00000372459 PRSS12P56730 875 aa21.67■■□□□ 1.06
CTSA-203ENST00000372459 ZBTB37Q5TC79 503 aa21.67■■□□□ 1.06
CTSA-203ENST00000372459 SNIP1Q8TAD8 396 aaKnown RBP21.67■■□□□ 1.06
CTSA-203ENST00000372459 RAB3CQ96E17 227 aa21.67■■□□□ 1.06
CTSA-203ENST00000372459 BEX1Q9HBH7 125 aa21.67■■□□□ 1.06
CTSA-203ENST00000372459 WISP2O76076 250 aa21.67■■□□□ 1.06
CTSA-203ENST00000372459 RAB3DO95716 219 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms