RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 LYPD6Q86Y78 171 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 RYDENQ9NUL5 291 aaKnown RBP11.28□□□□□ -0.6
GPC3-201ENST00000370818 CGGBP1Q9UFW8 167 aaPredicted RBP11.28□□□□□ -0.6
GPC3-201ENST00000370818 MRPS18BQ9Y676 258 aaKnown RBP11.28□□□□□ -0.6
GPC3-201ENST00000370818 LOC100289279A0A1B0GTE1 492 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 A0A1W2PPE3 182 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 KANTRA0A1W2PQU2 76 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 ZNF878C9JN71 531 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 TXNL1O43396 289 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 VAMP5O95183 116 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 RLN1P04808 185 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 ANOS1P23352 680 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 CSNK2A1P68400 391 aaPredicted RBP11.28□□□□□ -0.6
GPC3-201ENST00000370818 GABREP78334 506 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 MRPS10P82664 201 aaKnown RBP11.28□□□□□ -0.6
GPC3-201ENST00000370818 FABP9Q0Z7S8 132 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 GLYATL3Q5SZD4 288 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 C11orf88Q6PI97 169 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 KLHL24Q6TFL4 600 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 DHRS13Q6UX07 377 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 RHOUQ7L0Q8 258 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 TMEM123Q8N131 208 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 ZIC4Q8N9L1 334 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 OR9K2Q8NGE7 335 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 TNFAIP8L1Q8WVP5 186 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 GTF3AQ92664 365 aaKnown RBP11.28□□□□□ -0.6
GPC3-201ENST00000370818 FBXO17Q96EF6 278 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 ZNF471Q9BX82 626 aaPredicted RBP11.28□□□□□ -0.6
GPC3-201ENST00000370818 CCDC187A0A096LP49 1063 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 OR14I1A6ND48 311 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 GGT3PA6NGU5 568 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 ACOT7O00154 380 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 TLX3O43711 291 aaPredicted RBP11.27□□□□□ -0.6
GPC3-201ENST00000370818 F10P00742 488 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 MUC1P15941 1255 aaPredicted RBP11.27□□□□□ -0.6
GPC3-201ENST00000370818 AGTR1P30556 359 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 DLSTP36957 453 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 CYB561P49447 251 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 SPOCK1Q08629 439 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 C9orf152Q5JTZ5 239 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 GLT8D1Q68CQ7 371 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 ZNF813Q6ZN06 617 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 OR2AJ1Q8NGZ0 328 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 TMEM54Q969K7 222 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 SEC11CQ9BY50 192 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 TMEM138Q9NPI0 162 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 METTL1Q9UBP6 276 aaKnown RBP11.27□□□□□ -0.6
GPC3-201ENST00000370818 ZNF230Q9UIE0 474 aaPredicted RBP11.27□□□□□ -0.6
GPC3-201ENST00000370818 RHBDD3Q9Y3P4 386 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 DMRT1Q9Y5R6 373 aa11.27□□□□□ -0.6
GPC3-201ENST00000370818 LOC390937A0A1W2PQ73 354 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 DCDC2BA2VCK2 349 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 PINLYPA6NC86 204 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 C1orf196B1AJZ1 125 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 BCL2L11O43521 198 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 HTR2CP28335 458 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 CSNK1A1P48729 337 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 ZNF133P52736 654 aaPredicted RBP11.27□□□□□ -0.61
GPC3-201ENST00000370818 LY6G6FQ5SQ64 297 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 C10orf128Q5T292 105 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 TMEM164Q5U3C3 297 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 RAB12Q6IQ22 244 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 GGNQ86UU5 652 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 ASB13Q8WXK3 278 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 FGGYQ96C11 551 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 THOC3Q96J01 351 aaKnown RBP11.27□□□□□ -0.61
GPC3-201ENST00000370818 CNTNAP3BQ96NU0 1288 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 NAA11Q9BSU3 229 aaPredicted RBP11.27□□□□□ -0.61
GPC3-201ENST00000370818 EDEM2Q9BV94 578 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 ACKR4Q9NPB9 350 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 CDV3Q9UKY7 258 aaKnown RBP11.27□□□□□ -0.61
GPC3-201ENST00000370818 TTC28Q96AY4 2481 aa11.27□□□□□ -0.61
GPC3-201ENST00000370818 A0A1B0GTI1 187 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 NPIPA2E9PIF3 369 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 NPIPA3F8WFD2 350 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 SMAD9O15198 467 aaKnown RBP11.26□□□□□ -0.61
GPC3-201ENST00000370818 FGF16O43320 207 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 CLN5O75503 358 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 RD3LP0DJH9 198 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 PPT1P50897 306 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 BEX5Q5H9J7 111 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 OR6N1Q8NGY5 312 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 OR14L1PQ8NHC6 308 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 C15orf40Q8WUR7 153 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 ADAT3Q96EY9 351 aaPredicted RBP11.26□□□□□ -0.61
GPC3-201ENST00000370818 GPR87Q9BY21 358 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 CHST6Q9GZX3 395 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 SLC17A5Q9NRA2 495 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 ZNF319Q9P2F9 582 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 PHF3Q92576 2039 aaKnown RBP11.26□□□□□ -0.61
GPC3-201ENST00000370818 MEGF11A6BM72 1044 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 GJE1A6NN92 205 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 SYT7O43581 403 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 OR2F2O95006 317 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 SLC2A1P11166 492 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 HSD11B1P28845 292 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 PRKXP51817 358 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 RAC3P60763 192 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 FOXO1Q12778 655 aa11.26□□□□□ -0.61
GPC3-201ENST00000370818 OR2F1Q13607 317 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms