RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 DHRS7CA6NNS2 312 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 MYL12BO14950 172 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 CYB5R3P00387 301 aaPredicted RBP12.52□□□□□ -0.41
COL9A1-204ENST00000370496 HEXAP06865 529 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 GRPP07492 148 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 CCDC159P0C7I6 412 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 ZNF12P17014 697 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 CCR9P51686 369 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 CSNK2BP67870 215 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 ALKBH1Q13686 389 aaKnown RBP12.52□□□□□ -0.41
COL9A1-204ENST00000370496 TMEM249Q2WGJ8 235 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 CEP78Q5JTW2 689 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 OR2G6Q5TZ20 316 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 TMEM244Q5VVB8 128 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 EGFL6Q8IUX8 553 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 C1orf87Q8N0U7 546 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 PLPP7Q8NBV4 271 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 CCDC54Q8NEL0 328 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 ERGIC1Q969X5 290 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 SMR3AQ99954 134 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 GAL3ST1Q99999 423 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 COMMD4Q9H0A8 199 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 PPP1R3EQ9H7J1 279 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 FRRS1LQ9P0K9 344 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 NPTNQ9Y639 398 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 ACANP16112 2415 aa12.52□□□□□ -0.41
COL9A1-204ENST00000370496 LOC100289279A0A1B0GTE1 492 aa12.51□□□□□ -0.41
COL9A1-204ENST00000370496 CDH15P55291 814 aa12.51□□□□□ -0.41
COL9A1-204ENST00000370496 BTG1P62324 171 aa12.51□□□□□ -0.41
COL9A1-204ENST00000370496 MPPED2Q15777 294 aa12.51□□□□□ -0.41
COL9A1-204ENST00000370496 CLVS2Q5SYC1 327 aa12.51□□□□□ -0.41
COL9A1-204ENST00000370496 CLEC9AQ6UXN8 241 aa12.51□□□□□ -0.41
COL9A1-204ENST00000370496 OR14K1Q8NGZ2 314 aa12.51□□□□□ -0.41
COL9A1-204ENST00000370496 OR52N1Q8NH53 320 aa12.51□□□□□ -0.41
COL9A1-204ENST00000370496 HPSE2Q8WWQ2 592 aa12.51□□□□□ -0.41
COL9A1-204ENST00000370496 OR5P3Q8WZ94 311 aa12.51□□□□□ -0.41
COL9A1-204ENST00000370496 MYDGFQ969H8 173 aa12.51□□□□□ -0.41
COL9A1-204ENST00000370496 RNF166Q96A37 237 aaPredicted RBP12.51□□□□□ -0.41
COL9A1-204ENST00000370496 TRIM36Q9NQ86 728 aa12.51□□□□□ -0.41
COL9A1-204ENST00000370496 C1orf123Q9NWV4 160 aa12.51□□□□□ -0.41
COL9A1-204ENST00000370496 TRBV2A0A0J9YWF9 115 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 ANKRD61A6NGH8 418 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 A6NIN4 97 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 TMEM210A6NLX4 147 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 TMEM212A6NML5 194 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 PTGES3LE9PB15 166 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 E9PI62 339 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 TMEM178BH3BS89 294 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 PTBP3O95758 552 aaKnown RBP12.5□□□□□ -0.41
COL9A1-204ENST00000370496 NRASP01111 189 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 ZNF16P17020 682 aaPredicted RBP12.5□□□□□ -0.41
COL9A1-204ENST00000370496 ZNF20P17024 532 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 RBMXP38159 391 aaKnown RBP12.5□□□□□ -0.41
COL9A1-204ENST00000370496 TGM4P49221 684 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 GPM6AP51674 278 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 ZNF181Q2M3W8 571 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 MOB3CQ70IA8 216 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 WDR86Q86TI4 376 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 LURAP1LQ8IV03 231 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 RDH10Q8IZV5 341 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 OR13C3Q8NGS6 347 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 OR5AK2Q8NH90 309 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 CLDND2Q8NHS1 167 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 Q8TCH9 128 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 RNF170Q96K19 258 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 GPR173Q9NS66 373 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 FKBP14Q9NWM8 211 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 UBAP1Q9NZ09 502 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 CLEC2DQ9UHP7 191 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 HHLA2Q9UM44 414 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 TPRKBQ9Y3C4 175 aa12.5□□□□□ -0.41
COL9A1-204ENST00000370496 OR5B21A6NL26 309 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 OR4C45A6NMZ5 311 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 WNT9BO14905 357 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 LMX1BO60663 402 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 GATBO75879 557 aaKnown RBP12.49□□□□□ -0.41
COL9A1-204ENST00000370496 IGHV2-70P01814 119 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 ISG15P05161 165 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 CDK1P06493 297 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 C21orf33P30042 268 aaPredicted RBP12.49□□□□□ -0.41
COL9A1-204ENST00000370496 IL2RGP31785 369 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 THBS2P35442 1172 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 MDH2P40926 338 aaKnown RBP12.49□□□□□ -0.41
COL9A1-204ENST00000370496 GZMKP49863 264 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 GTF2A1P52655 376 aaPredicted RBP12.49□□□□□ -0.41
COL9A1-204ENST00000370496 GNG3P63215 75 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 ZNF154Q13106 437 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 CDK5R1Q15078 307 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 ZMYND11Q15326 602 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 CEACAM21Q3KPI0 293 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 CCDC58Q4VC31 144 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 DMRTC1Q5HYR2 192 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 Q6ZSR3 168 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 MUC20Q8N307 709 aaPredicted RBP12.49□□□□□ -0.41
COL9A1-204ENST00000370496 SPICQ8N5J4 248 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 BOLLQ8N9W6 283 aaKnown RBP12.49□□□□□ -0.41
COL9A1-204ENST00000370496 OR1M1Q8NGA1 313 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 TSEN15Q8WW01 171 aaKnown RBP12.49□□□□□ -0.41
COL9A1-204ENST00000370496 GATAD2BQ8WXI9 593 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 RAB39BQ96DA2 213 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms