RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 FAM122BQ7Z309 247 aa4.71□□□□□ -1.65
SMNDC1-202ENST00000369603 LSRQ86X29 649 aaPredicted RBP4.71□□□□□ -1.65
SMNDC1-202ENST00000369603 CDH26Q8IXH8 852 aa4.71□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF519Q8TB69 540 aa4.71□□□□□ -1.65
SMNDC1-202ENST00000369603 KISS1RQ969F8 398 aaPredicted RBP4.71□□□□□ -1.65
SMNDC1-202ENST00000369603 SDHCQ99643 169 aaPredicted RBP4.71□□□□□ -1.65
SMNDC1-202ENST00000369603 CHST6Q9GZX3 395 aa4.71□□□□□ -1.65
SMNDC1-202ENST00000369603 PPP1R3EQ9H7J1 279 aa4.71□□□□□ -1.65
SMNDC1-202ENST00000369603 ACKR4Q9NPB9 350 aa4.71□□□□□ -1.65
SMNDC1-202ENST00000369603 BIN3Q9NQY0 253 aa4.71□□□□□ -1.65
SMNDC1-202ENST00000369603 SEMA5BQ9P283 1151 aa4.71□□□□□ -1.65
SMNDC1-202ENST00000369603 LSM5Q9Y4Y9 91 aaKnown RBP4.71□□□□□ -1.65
SMNDC1-202ENST00000369603 DENND4CQ5VZ89 1909 aa4.71□□□□□ -1.65
SMNDC1-202ENST00000369603 TICRRQ7Z2Z1 1910 aa4.71□□□□□ -1.65
SMNDC1-202ENST00000369603 MDC1Q14676 2089 aaKnown RBP4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 TRBV5-5A0A0J9YX44 114 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 ANKRD20A5PA0PJZ0 165 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 PRRG2O14669 202 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 GNB3P16520 340 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 FSTP19883 344 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 PTGFRP43088 359 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 NPY4RP50391 375 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 FOXL2P58012 376 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 NANOS3P60323 173 aaKnown RBP4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 RAB1AP62820 205 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 GSG1Q2KHT4 349 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 LINC00303Q3SY05 128 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 LINC01590Q5TEZ4 76 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 FDX2Q6P4F2 183 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 MEX3BQ6ZN04 569 aaKnown RBP4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 ZNF574Q6ZN55 896 aaPredicted RBP4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 TMUB2Q71RG4 321 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 NLRC3Q7RTR2 1065 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 ZNF709Q8N972 641 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 OR2M7Q8NG81 312 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 OR8B12Q8NGG6 310 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 IL1F10Q8WWZ1 152 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 ARL11Q969Q4 196 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 PTX4Q96A99 478 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 KIRREL1Q96J84 757 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 NKX3-1Q99801 234 aaPredicted RBP4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 PRMT8Q9NR22 394 aaPredicted RBP4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 TRAPPC2LQ9UL33 140 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 GPR137BO60478 399 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 IFNA2P01563 188 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 RAD52P43351 418 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 MAGEB1P43366 347 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 IDH3GP51553 393 aaPredicted RBP4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 UBE2MP61081 183 aaKnown RBP4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 ZNF774Q6NX45 483 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 GLDNQ6ZMI3 551 aaPredicted RBP4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 LGI3Q8N145 548 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 OSR2Q8N2R0 312 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 ZDHHC22Q8N966 263 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 PXT1Q8NFP0 134 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 OR11L1Q8NGX0 322 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 SLC25A31Q9H0C2 315 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 KLHDC2Q9Y2U9 406 aa4.71□□□□□ -1.66
SMNDC1-202ENST00000369603 LINC00862A6NCI5 91 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 MS4A18H0YCH9 400 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 DCTN6O00399 190 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 DEGS1O15121 323 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 BET1O15155 118 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 SHOXO15266 292 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 UPK3AO75631 287 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 LYPD3O95274 346 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 OR4E1P0C645 316 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 HRH1P35367 487 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 CATR1Q13166 79 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 TAF9Q16594 264 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 MS4A18Q3C1V0 323 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 PABPC1L2AQ5JQF8 200 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 MRPL14Q6P1L8 145 aaKnown RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 UNQ9370/PRO34162Q6UXP9 181 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 SVBPQ8N300 66 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 ZNF611Q8N823 705 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 NFAM1Q8NET5 270 aaPredicted RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 OR2AK2Q8NG84 335 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 OR52N4Q8NGI2 321 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 OR1S1Q8NH92 325 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 TERB2Q8NHR7 220 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 MRPS24Q96EL2 167 aaKnown RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 CNTD2Q9H8S5 307 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 KIF25Q9UIL4 384 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 TRAV8-7A0A075B6U6 113 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 A0A0J9YW62 118 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 CD300LBA8K4G0 201 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 C1orf196B1AJZ1 125 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 ISG15P05161 165 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 HIST1H1DP16402 221 aaKnown RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 CXCL3P19876 107 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 SELENOPP49908 381 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 CAV2P51636 162 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 OR8G1Q15617 311 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 ST3GAL2Q16842 350 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 EIF2S3LQ2VIR3 472 aaKnown RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 PAN3Q58A45 887 aaKnown RBP4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 Q5BKY6 102 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 FAM27BQ5VT28 67 aa4.7□□□□□ -1.66
SMNDC1-202ENST00000369603 FNDC7Q5VTL7 733 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms