RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 FXYD6Q9H0Q3 95 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 PLEKHA2Q9HB19 425 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 FAM215AQ9Y5M1 114 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 PUS1Q9Y606 427 aaKnown RBP eCLIP6.06□□□□□ -1.44
CSDE1-204ENST00000369530 ENPP4Q9Y6X5 453 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 TEX13DA0A0J9YY54 714 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-204ENST00000369530 EPPINO95925 133 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 GASTP01350 101 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 IL6RP08887 468 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-204ENST00000369530 GZMBP10144 247 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 ATP6V1E1P36543 226 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 SERPINF1P36955 418 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 LUMP51884 338 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-204ENST00000369530 DVL1P1P54792 670 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-204ENST00000369530 RGS8P57771 180 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-204ENST00000369530 C11orf87Q6NUJ2 197 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 B3GLCTQ6Y288 498 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 RBM45Q8IUH3 476 aaKnown RBP6.06□□□□□ -1.44
CSDE1-204ENST00000369530 DND1Q8IYX4 353 aaKnown RBP6.06□□□□□ -1.44
CSDE1-204ENST00000369530 SAMD12Q8N8I0 201 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 OR4K5Q8NGD3 323 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 OR10D4PQ8NGN7 298 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 OR2V1Q8NHB1 315 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 AMDHD1Q96NU7 426 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 POTEKPQ9BYX7 375 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 TMEM38AQ9H6F2 299 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 CYTL1Q9NRR1 136 aa6.06□□□□□ -1.44
CSDE1-204ENST00000369530 A0A1W2PPH5 198 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 C7orf77A4D0Y5 90 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 A6NIZ1 184 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 DUXAA6NLW8 204 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF726A6NNF4 738 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 AHRRA9YTQ3 701 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF587BE7ETH6 402 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 ADAP1O75689 374 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 ARAFP10398 606 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 PCBP3P57721 371 aaKnown RBP6.05□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF311Q5JNZ3 666 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 UBE2NLQ5JXB2 153 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 PRSS57Q6UWY2 283 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 LHFPL4Q7Z7J7 247 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF546Q86UE3 836 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 LRRTM1Q86UE6 522 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 NUDT10Q8NFP7 164 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 OR6N1Q8NGY5 312 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 C15orf40Q8WUR7 153 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 RHOFQ9HBH0 211 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 DNAJC27Q9NZQ0 273 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 STARD10Q9Y365 291 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 UBE2QL1A1L167 161 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 UNC119BA6NIH7 251 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 FAM183AA6NL82 134 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 RNF13O43567 381 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 SOD3P08294 240 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 ERVFC1-1P60608 527 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 ELAVL1Q15717 326 aaKnown RBP6.05□□□□□ -1.44
CSDE1-204ENST00000369530 SMIM15Q7Z3B0 74 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 BAP18Q8IXM2 172 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 COX18Q8N8Q8 333 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 DUSP19Q8WTR2 217 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 WNT2BQ93097 391 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 CMBLQ96DG6 245 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 OR14A2Q96R54 314 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 MSL2Q9HCI7 577 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 RASD1Q9Y272 281 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 GPR55Q9Y2T6 319 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-204ENST00000369530 ITPR2Q14571 2701 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 NKX6-3A6NJ46 265 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 CPSF4LA6NMK7 179 aaKnown RBP6.05□□□□□ -1.44
CSDE1-204ENST00000369530 SYT7O43581 403 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 LYPD3O95274 346 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 H1F0P07305 194 aaKnown RBP6.05□□□□□ -1.44
CSDE1-204ENST00000369530 SLC35E2P0CK97 266 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 TLE4Q04727 773 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 KIAA0141Q14154 515 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-204ENST00000369530 TMEM241Q24JQ0 296 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 RAB12Q6IQ22 244 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 DHRS11Q6UWP2 260 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 SSX6Q7RTT6 188 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 SLC30A8Q8IWU4 369 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF295-AS1Q8N0V1 137 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 OR5M8Q8NGP6 311 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 RNASE8Q8TDE3 154 aaKnown RBP6.05□□□□□ -1.44
CSDE1-204ENST00000369530 MUCL1Q96DR8 90 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 MMABQ96EY8 250 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF75AQ96N20 296 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 EXO5Q9H790 373 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 OR10H1Q9Y4A9 318 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 V9GYS6 101 aa6.05□□□□□ -1.44
CSDE1-204ENST00000369530 BAHCC1Q9P281 2608 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 NPIPA5A0A0B4J1W7 369 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 NPIPA7E9PJI5 369 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 FAAHO00519 579 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 GMFGO60234 142 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 NPIPA8P0DM63 369 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 PSMB6P28072 239 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 UQCRFS1P47985 274 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 SLC16A1P53985 500 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 CLDN12P56749 244 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 EXT1Q16394 746 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms