RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 TIGITQ495A1 244 aa16.33■□□□□ 0.2
SNX27-202ENST00000368841 NCR3LG1Q68D85 454 aa16.33■□□□□ 0.2
SNX27-202ENST00000368841 LYG1Q8N1E2 194 aa16.33■□□□□ 0.2
SNX27-202ENST00000368841 OR1L4Q8NGR5 311 aa16.33■□□□□ 0.2
SNX27-202ENST00000368841 M1APQ8TC57 530 aa16.33■□□□□ 0.2
SNX27-202ENST00000368841 CCDC187A0A096LP49 1063 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 A0A1W2PNV4 684 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 LALBAP00709 142 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 SLC6A12P48065 614 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 VAMP3Q15836 100 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 GSG1Q2KHT4 349 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 BTF3L4Q96K17 158 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 ZAR1LA6NP61 321 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 RNASEKQ6P5S7 137 aaKnown RBP16.32■□□□□ 0.2
SNX27-202ENST00000368841 PRR13Q9NZ81 148 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 DUS4LO95620 317 aaKnown RBP16.32■□□□□ 0.2
SNX27-202ENST00000368841 MRGPREQ86SM8 312 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 LRP11Q86VZ4 500 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 CMTM3Q96MX0 182 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 MOB1AQ9H8S9 216 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 SLC25A22Q9H936 323 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 GATCO43716 136 aaKnown RBP16.32■□□□□ 0.2
SNX27-202ENST00000368841 PTBP3O95758 552 aaKnown RBP16.32■□□□□ 0.2
SNX27-202ENST00000368841 GIPP09681 153 aaPredicted RBP16.32■□□□□ 0.2
SNX27-202ENST00000368841 ATF1P18846 271 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 SMIM21Q3B7S5 101 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 OR4C16Q8NGL9 310 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 DSCR4P56555 118 aaPredicted RBP16.32■□□□□ 0.2
SNX27-202ENST00000368841 SFTPA1Q8IWL2 248 aa16.32■□□□□ 0.2
SNX27-202ENST00000368841 DDOSTP39656 456 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 TFF2Q03403 129 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 DPTQ07507 201 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 TAAR9Q96RI9 348 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 FBXO34Q9NWN3 711 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 PSG11Q9UQ72 335 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 COL16A1Q07092 1604 aaPredicted RBP16.31■□□□□ 0.2
SNX27-202ENST00000368841 ABCD3P28288 659 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 YBX1P67809 324 aaKnown RBP16.31■□□□□ 0.2
SNX27-202ENST00000368841 MRGPRX4Q96LA9 322 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 NRTNQ99748 197 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 LRRC3CA6NJW4 275 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 GPNMBQ14956 572 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 SPINK14Q6IE38 97 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 GPX8Q8TED1 209 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 FOXB1Q99853 325 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 A0A1B0GTH9 108 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 AGFG2O95081 481 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 MMP7P09237 267 aaPredicted RBP16.31■□□□□ 0.2
SNX27-202ENST00000368841 ARRB2P32121 409 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 FGF8P55075 233 aaPredicted RBP16.31■□□□□ 0.2
SNX27-202ENST00000368841 SMIM19Q96E16 107 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 POM121L2Q96KW2 1035 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 ALG1L2C9J202 215 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 LYPD8Q6UX82 237 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 ASIC5Q9NY37 505 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 SERGEFQ9UGK8 458 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 B9D1Q9UPM9 204 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 TOPAZ1Q8N9V7 1692 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 TCRBV5S1A1TA0A578 114 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 ANKUB1A6NFN9 424 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 IFITM5A6NNB3 132 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 METTL12A8MUP2 240 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 SLC25A5P05141 298 aaKnown RBP16.31■□□□□ 0.2
SNX27-202ENST00000368841 ADRB1P08588 477 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 PELI1Q96FA3 418 aa16.31■□□□□ 0.2
SNX27-202ENST00000368841 ZNF629Q9UEG4 869 aaPredicted RBP16.31■□□□□ 0.2
SNX27-202ENST00000368841 TMEM129A0AVI4 362 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 E5RGE8 158 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 GABRG2P18507 467 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 AVPR2P30518 371 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 FFAR4Q5NUL3 377 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 CABLES2Q9BTV7 478 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 TMPRSS5Q9H3S3 457 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 LAMP3Q9UQV4 416 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 NSG2Q9Y328 171 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 JTBO76095 146 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 RPS4XP62701 263 aaKnown RBP16.3■□□□□ 0.2
SNX27-202ENST00000368841 CDK5Q00535 292 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 TUSC1Q2TAM9 212 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 PPP1R1CQ8WVI7 109 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 ZDHHC11Q9H8X9 412 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 SLX4Q8IY92 1834 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 OR4C3Q8NH37 302 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 WDR89Q96FK6 387 aaPredicted RBP16.3■□□□□ 0.2
SNX27-202ENST00000368841 HES4Q9HCC6 221 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 ADAM20O43506 726 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 MPZL1O95297 269 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 NQO2P16083 231 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 PPP1CAP62136 330 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 ZNF774Q6NX45 483 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 LYG2Q86SG7 212 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 AMER3Q8N944 861 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 EXTL1Q92935 676 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 XKRY2A2RUG3 117 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 BMPR1BO00238 502 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 IL5P05113 134 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 SLC38A6Q8IZM9 456 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 LURAP1Q96LR2 239 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 FAAP24Q9BTP7 215 aa16.3■□□□□ 0.2
SNX27-202ENST00000368841 TCRBV5S2A0A599 114 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms