RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PRSS3P35030 304 aa9.4□□□□□ -0.9
TPM3-212ENST00000368533 ARG2P78540 354 aa9.4□□□□□ -0.9
TPM3-212ENST00000368533 EGR3Q06889 387 aa9.4□□□□□ -0.9
TPM3-212ENST00000368533 SPOCK1Q08629 439 aa9.4□□□□□ -0.9
TPM3-212ENST00000368533 SLC17A1Q14916 467 aa9.4□□□□□ -0.9
TPM3-212ENST00000368533 EIF2S3LQ2VIR3 472 aaKnown RBP9.4□□□□□ -0.9
TPM3-212ENST00000368533 C9orf135Q5VTT2 229 aa9.4□□□□□ -0.9
TPM3-212ENST00000368533 RAB12Q6IQ22 244 aa9.4□□□□□ -0.9
TPM3-212ENST00000368533 TMPPEQ6ZT21 453 aa9.4□□□□□ -0.9
TPM3-212ENST00000368533 OR2W3Q7Z3T1 314 aa9.4□□□□□ -0.9
TPM3-212ENST00000368533 C15orf40Q8WUR7 153 aa9.4□□□□□ -0.9
TPM3-212ENST00000368533 OR2A7Q96R45 310 aa9.4□□□□□ -0.9
TPM3-212ENST00000368533 EXO5Q9H790 373 aa9.4□□□□□ -0.9
TPM3-212ENST00000368533 PLEKHA1Q9HB21 404 aa9.4□□□□□ -0.9
TPM3-212ENST00000368533 RASL12Q9NYN1 266 aa9.4□□□□□ -0.9
TPM3-212ENST00000368533 POLR1DQ9Y2S0 133 aa9.4□□□□□ -0.9
TPM3-212ENST00000368533 NCOA6Q14686 2063 aaPredicted RBP9.4□□□□□ -0.9
TPM3-212ENST00000368533 BSNQ9UPA5 3926 aa9.4□□□□□ -0.9
TPM3-212ENST00000368533 LOC100509620A0A075B734 347 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 TRBV5-5A0A0J9YX44 114 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 GGT3PA6NGU5 568 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 ZNF208O43345 1280 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 XRCC3O43542 346 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 PNPP00491 289 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 ITGA5P08648 1049 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 SLC2A1P11166 492 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 NQO2P16083 231 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 ZNF823P16415 610 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 NBL1P41271 181 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 RIDAP52758 137 aaKnown RBP9.4□□□□□ -0.91
TPM3-212ENST00000368533 FOXC1Q12948 553 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 MICBQ29980 383 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 PLEKHN1Q494U1 663 aaPredicted RBP9.4□□□□□ -0.91
TPM3-212ENST00000368533 OR10K2Q6IF99 312 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 KCTD18Q6PI47 426 aaPredicted RBP9.4□□□□□ -0.91
TPM3-212ENST00000368533 UNQ6126/PRO20091Q6UXV3 157 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.4□□□□□ -0.91
TPM3-212ENST00000368533 GTPBP8Q8N3Z3 284 aaPredicted RBP9.4□□□□□ -0.91
TPM3-212ENST00000368533 LRRC18Q8N456 261 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 PNPLA2Q96AD5 504 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 ZNF837Q96EG3 531 aaPredicted RBP9.4□□□□□ -0.91
TPM3-212ENST00000368533 CHST6Q9GZX3 395 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 TREM1Q9NP99 234 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 EMC9Q9Y3B6 208 aa9.4□□□□□ -0.91
TPM3-212ENST00000368533 TNRC6AQ8NDV7 1962 aaKnown RBP9.4□□□□□ -0.91
TPM3-212ENST00000368533 TXNDC12O95881 172 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 CD3DP04234 171 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 CASP6P55212 293 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 GLYATL3Q5SZD4 288 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 ZNF626Q68DY1 528 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 DTX1Q86Y01 620 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.39□□□□□ -0.91
TPM3-212ENST00000368533 FDCSPQ8NFU4 85 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 SLC25A44Q96H78 314 aaPredicted RBP9.39□□□□□ -0.91
TPM3-212ENST00000368533 OR8B4Q96RC9 309 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 ZFP57Q9NU63 452 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 TAS2R4Q9NYW5 299 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 IGLV3-32A0A0A0MS00 114 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 IGLV1-36A0A0B4J1U3 117 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 F5H5P2 479 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 PHYHO14832 338 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 CTAG2O75638 210 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 NDUFB6O95139 128 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 CYC1P08574 325 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 NDUFB7P17568 137 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 CASRP41180 1078 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 MFGE8Q08431 387 aaPredicted RBP9.39□□□□□ -0.91
TPM3-212ENST00000368533 AIMP2Q13155 320 aaKnown RBP9.39□□□□□ -0.91
TPM3-212ENST00000368533 GFOD2Q3B7J2 385 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 ELFN2Q5R3F8 820 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 PHYHD1Q5SRE7 291 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 DCXRQ7Z4W1 244 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 ZNF546Q86UE3 836 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 ZNF679Q8IYX0 411 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 MUC20Q8N307 709 aaPredicted RBP9.39□□□□□ -0.91
TPM3-212ENST00000368533 SPICQ8N5J4 248 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 OR2M7Q8NG81 312 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 ABHD3Q8WU67 409 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 MEGF10Q96KG7 1140 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 NAA11Q9BSU3 229 aaPredicted RBP9.39□□□□□ -0.91
TPM3-212ENST00000368533 ABHD6Q9BV23 337 aa9.39□□□□□ -0.91
TPM3-212ENST00000368533 TMEM272A0A1B0GTI8 110 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 CDRT15L2A8MXV6 281 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 TRAF3IP2O43734 574 aaPredicted RBP9.38□□□□□ -0.91
TPM3-212ENST00000368533 CLN5O75503 358 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 PRF1P14222 555 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 ZNF44P15621 663 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 GNALP38405 381 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 P2RY4P51582 365 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 PRSS12P56730 875 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 SCGB2B2Q4G0G5 96 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 NCMAPQ5T1S8 102 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 OR13C3Q8NGS6 347 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 OR6N1Q8NGY5 312 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 ZBTB8AQ96BR9 441 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 RBM14Q96PK6 669 aaKnown RBP9.38□□□□□ -0.91
TPM3-212ENST00000368533 PIGQQ9BRB3 760 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 SLC25A32Q9H2D1 315 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 B3GALT5Q9Y2C3 310 aa9.38□□□□□ -0.91
TPM3-212ENST00000368533 LIPGQ9Y5X9 500 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms