RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 LMF1Q96S06 567 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 CST11Q9H112 138 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 SAV1Q9H4B6 383 aaPredicted RBP10.18□□□□□ -0.78
USF1-201ENST00000368019 MOB1AQ9H8S9 216 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 FAM60AQ9NP50 221 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 G6PC2Q9NQR9 355 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.18□□□□□ -0.78
USF1-201ENST00000368019 ASF1BQ9NVP2 202 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 COA4Q9NYJ1 87 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 OR52A1Q9UKL2 312 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 WIF1Q9Y5W5 379 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 MPDZO75970 2070 aa10.18□□□□□ -0.78
USF1-201ENST00000368019 FITM1A5D6W6 292 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 A8MVM7 634 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 TMEM14DPA8MWL7 114 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 F8W036 122 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 HLA-DQA2P01906 255 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 ADCYAP1P18509 176 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 SOX8P57073 446 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 SLC26A5P58743 744 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 BLOC1S1P78537 153 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 ZNF117Q03924 483 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 AIMP2Q13155 320 aaKnown RBP10.17□□□□□ -0.78
USF1-201ENST00000368019 SSPNQ14714 243 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 CDNFQ49AH0 187 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 SCGB2B2Q4G0G5 96 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 TMEM128Q5BJH2 165 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 AVPI1Q5T686 147 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 RHBDD2Q6NTF9 364 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 CBLN3Q6UW01 205 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 IGFL3Q6UXB1 125 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 GRINAQ7Z429 371 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 TRAPPC6BQ86SZ2 158 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 PEG10Q86TG7 708 aaKnown RBP10.17□□□□□ -0.78
USF1-201ENST00000368019 KDM8Q8N371 416 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 SLC26A10Q8NG04 563 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 LILRB1Q8NHL6 650 aaPredicted RBP10.17□□□□□ -0.78
USF1-201ENST00000368019 ADIPOR1Q96A54 375 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 MRGPRFQ96AM1 343 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 SMIM8Q96KF7 97 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 IP6K3Q96PC2 410 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 FANCFQ9NPI8 374 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 CYTL1Q9NRR1 136 aa10.17□□□□□ -0.78
USF1-201ENST00000368019 ERRFI1Q9UJM3 462 aaPredicted RBP10.17□□□□□ -0.78
USF1-201ENST00000368019 TMEM235A6NFC5 223 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 C9J4A7 227 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 GPR31O00270 319 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 PLPP3O14495 311 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 TSPAN2O60636 221 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 SLC16A7O60669 478 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 AHSA1O95433 338 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 SFT2D2O95562 160 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 CLDN1O95832 211 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 IGKV3-11P04433 115 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 IFNA6P05013 189 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 S100A8P05109 93 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 FBXO45P0C2W1 286 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 FAM157CP0CG43 387 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 CTLA4P16410 223 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 ZNF823P16415 610 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 FPR2P25090 351 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 ABCD3P28288 659 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 ECI1P42126 302 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 PNLIPRP2P54317 469 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 SURF2Q15527 256 aaPredicted RBP10.16□□□□□ -0.78
USF1-201ENST00000368019 RNF212Q495C1 297 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 DCAF10Q5QP82 559 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 H3F3CQ6NXT2 135 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 CORO6Q6QEF8 472 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 RHOUQ7L0Q8 258 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 NAA40Q86UY6 237 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 MISPQ8IVT2 679 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 TMEM151BQ8IW70 566 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 SHISA5Q8N114 240 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 JAGN1Q8N5M9 183 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 COMMD1Q8N668 190 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 OR10R2Q8NGX6 335 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 NUBPLQ8TB37 319 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 PRR7Q8TB68 274 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 ST7LQ8TDW4 575 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 GLYATL2Q8WU03 294 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 MVB12AQ96EY5 273 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 EGLN1Q9GZT9 426 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 NXF5Q9H1B4 397 aaKnown RBP10.16□□□□□ -0.78
USF1-201ENST00000368019 KCNK15Q9H427 330 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 ZNF552Q9H707 407 aaPredicted RBP10.16□□□□□ -0.78
USF1-201ENST00000368019 UQCC1Q9NVA1 299 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 CTSFQ9UBX1 484 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 LPAR3Q9UBY5 353 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 CGGBP1Q9UFW8 167 aaPredicted RBP10.16□□□□□ -0.78
USF1-201ENST00000368019 GTF2A1LQ9UNN4 478 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 GPR132Q9UNW8 380 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 TMED7Q9Y3B3 224 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 CSAG2Q9Y5P2 127 aa10.16□□□□□ -0.78
USF1-201ENST00000368019 APCP25054 2843 aa10.15□□□□□ -0.78
USF1-201ENST00000368019 IGKV3D-11A0A0A0MRZ8 115 aa10.15□□□□□ -0.78
USF1-201ENST00000368019 A1L4Q6 167 aa10.15□□□□□ -0.78
USF1-201ENST00000368019 OR6C76A6NM76 312 aa10.15□□□□□ -0.78
USF1-201ENST00000368019 FIGNL2A6NMB9 653 aa10.15□□□□□ -0.78
USF1-201ENST00000368019 C17orf105B2RV13 164 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms