RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 NLKQ9UBE8 527 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 CYB5R1Q9UHQ9 305 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 ZNF222Q9UK12 451 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 A4GNTQ9UNA3 340 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 ZNF256Q9Y2P7 627 aaPredicted RBP11.62□□□□□ -0.55
VAMP4-202ENST00000367740 SH2D7A6NKC9 451 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-202ENST00000367740 NUDT19A8MXV4 375 aa11.61□□□□□ -0.55
VAMP4-202ENST00000367740 OTX1P32242 354 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-202ENST00000367740 CDKN2AP42771 156 aaKnown RBP11.61□□□□□ -0.55
VAMP4-202ENST00000367740 GPR4P46093 362 aa11.61□□□□□ -0.55
VAMP4-202ENST00000367740 GP2P55259 537 aaKnown RBP11.61□□□□□ -0.55
VAMP4-202ENST00000367740 STX1BP61266 288 aa11.61□□□□□ -0.55
VAMP4-202ENST00000367740 ST3GAL3Q11203 375 aa11.61□□□□□ -0.55
VAMP4-202ENST00000367740 ZBED5Q49AG3 693 aa11.61□□□□□ -0.55
VAMP4-202ENST00000367740 C9orf66Q5T8R8 295 aa11.61□□□□□ -0.55
VAMP4-202ENST00000367740 CCDC80Q76M96 950 aa11.61□□□□□ -0.55
VAMP4-202ENST00000367740 OVCH2Q7RTZ1 564 aa11.61□□□□□ -0.55
VAMP4-202ENST00000367740 C16orf82Q7Z2V1 217 aa11.61□□□□□ -0.55
VAMP4-202ENST00000367740 OR6V1Q8N148 313 aa11.61□□□□□ -0.55
VAMP4-202ENST00000367740 KLHL30-AS1Q8NEE0 82 aa11.61□□□□□ -0.55
VAMP4-202ENST00000367740 SPTSSAQ969W0 71 aa11.61□□□□□ -0.55
VAMP4-202ENST00000367740 ROPN1BQ9BZX4 212 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-202ENST00000367740 OPA3Q9H6K4 179 aa11.61□□□□□ -0.55
VAMP4-202ENST00000367740 ROPN1Q9HAT0 212 aaPredicted RBP11.61□□□□□ -0.55
VAMP4-202ENST00000367740 THAP1Q9NVV9 213 aa11.61□□□□□ -0.55
VAMP4-202ENST00000367740 USE1Q9NZ43 259 aa11.61□□□□□ -0.55
VAMP4-202ENST00000367740 SCOCQ9UIL1 159 aa11.61□□□□□ -0.55
VAMP4-202ENST00000367740 KIAA1109Q2LD37 5005 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 A0A1W2PPH5 198 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 PSMB11A5LHX3 300 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 SNRNP70P08621 437 aaKnown RBP11.6□□□□□ -0.55
VAMP4-202ENST00000367740 CRABP1P29762 137 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 SLC6A1P30531 599 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 ENTPD1P49961 510 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 RAB25P57735 213 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 RPL31P62899 125 aaKnown RBP11.6□□□□□ -0.55
VAMP4-202ENST00000367740 ZNF273Q14593 569 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 GPR139Q6DWJ6 353 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 DNM1P34Q6PK57 102 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 CYB561A3Q8NBI2 242 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 OR2AJ1Q8NGZ0 328 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 RPL3LQ92901 407 aaKnown RBP11.6□□□□□ -0.55
VAMP4-202ENST00000367740 SPSB4Q96A44 273 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 PRRC1Q96M27 445 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 KAT8Q9H7Z6 458 aaKnown RBP11.6□□□□□ -0.55
VAMP4-202ENST00000367740 LIN7BQ9HAP6 207 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 SSU72Q9NP77 194 aaKnown RBP11.6□□□□□ -0.55
VAMP4-202ENST00000367740 NRIP3Q9NQ35 241 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 VNN3Q9NY84 501 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 BAG5Q9UL15 447 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 HILPDAQ9Y5L2 63 aa11.6□□□□□ -0.55
VAMP4-202ENST00000367740 DSCAML1Q8TD84 2053 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 hCG_1809904A0A1W2PP81 198 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 A0A1W2PPE2 198 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 A0A1W2PR64 198 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 A0A1W2PRV1 198 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 AMY1AP04745 511 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 AMY2AP04746 511 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 FRMD6-AS1P0C7T7 363 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 SLC2A1P11166 492 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 PSG2P11465 335 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 DDOSTP39656 456 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 SLC18A1P54219 525 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 SLC34A1Q06495 639 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 ZNF770Q6IQ21 691 aaPredicted RBP11.59□□□□□ -0.55
VAMP4-202ENST00000367740 DRAM2Q6UX65 266 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 DHDDSQ86SQ9 333 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 ZNF329Q86UD4 541 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 DPP10Q8N608 796 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 OR11H6Q8NGC7 330 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 SDSLQ96GA7 329 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 RAX2Q96IS3 184 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 GPX7Q96SL4 187 aaPredicted RBP11.59□□□□□ -0.55
VAMP4-202ENST00000367740 B9D1Q9UPM9 204 aa11.59□□□□□ -0.55
VAMP4-202ENST00000367740 SORL1Q92673 2214 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 PGA5P0DJD9 388 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 GNALP38405 381 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 VEGFCP49767 419 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 GZMMP51124 257 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 CAPZA1P52907 286 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 DLX6P56179 175 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 OR12D2P58182 307 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 FAM3AP98173 230 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 VMACQ2NL98 169 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 AGBL2Q5U5Z8 902 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 TMPRSS11FQ6ZWK6 438 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 SLC16A9Q7RTY1 509 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 CPLX4Q7Z7G2 160 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 OR4M1Q8NGD0 313 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 OR10A6Q8NH74 314 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 BCAS4Q8TDM0 211 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 AKR1E2Q96JD6 320 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 CGREF1Q99674 301 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 PAIP2Q9BPZ3 127 aaKnown RBP11.58□□□□□ -0.56
VAMP4-202ENST00000367740 RHCGQ9UBD6 479 aa11.58□□□□□ -0.56
VAMP4-202ENST00000367740 C17orf98A8MV24 154 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 XRCC2O43543 280 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 NDUFB2O95178 105 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 TXNDC12O95881 172 aa11.57□□□□□ -0.56
VAMP4-202ENST00000367740 GLRA1P23415 457 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms