RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 MREGQ8N565 214 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 DTX3Q8N9I9 347 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 ZNRF1Q8ND25 227 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 GJC3Q8NFK1 279 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 OR5D13Q8NGL4 314 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 C12orf43Q96C57 262 aaKnown RBP6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 RAB3IPQ96QF0 476 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 P2RX4Q99571 388 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 ZNF649Q9BS31 505 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 SLC22A4Q9H015 551 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 TLNRD1Q9H1K6 362 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 KCNK9Q9NPC2 374 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 GRHPRQ9UBQ7 328 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 SCOCQ9UIL1 159 aa6.74□□□□□ -1.33
HMGB1P39-201ENST00000366304 IGKV1D-17A0A075B6S4 117 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 RBMY1BA6NDE4 496 aaKnown RBP6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 RBMY1EA6NEQ0 496 aaKnown RBP6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 GGT3PA6NGU5 568 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 TRPC5OSA6NMA1 111 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 FAM90A22PA8MWA6 464 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 ODF3BA8MYP8 253 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 HMGB1P1B2RPK0 211 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 BHLHE40O14503 412 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 IFNW1P05000 195 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 ACAA1P09110 424 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 RBMY1DP0C7P1 496 aaKnown RBP6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 CCL3L1P16619 93 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 POU1F1P28069 291 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 GPR4P46093 362 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 CAV3P56539 151 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 FXYD6P3P58550 94 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 MALLQ13021 153 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 KRR1Q13601 381 aaKnown RBP6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 SSX2Q16385 188 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 TMEM200BQ69YZ2 307 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 TBPL2Q6SJ96 375 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 ZNF782Q6ZMW2 699 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 DPY19L4Q7Z388 723 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 OAFQ86UD1 273 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 FAM156AQ8NDB6 213 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 SLC26A10Q8NG04 563 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 RPS4Y2Q8TD47 263 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 RPL3LQ92901 407 aaKnown RBP6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 SPDL1Q96EA4 605 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 ZNF570Q96NI8 536 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 GPR61Q9BZJ8 451 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 NMNAT1Q9HAN9 279 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 EDA2RQ9HAV5 297 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 ZNF222Q9UK12 451 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 BLOC1S6Q9UL45 172 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 A4GNTQ9UNA3 340 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 POLR1DQ9Y2S0 133 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 SNX13Q9Y5W8 968 aa6.73□□□□□ -1.33
HMGB1P39-201ENST00000366304 EFCAB9A8MZ26 197 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 EVPLLA8MZ36 301 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 F2RL2O00254 374 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 SOCS2O14508 198 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 FFAR1O14842 300 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 AKR7A2O43488 359 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 RAMP3O60896 148 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 LPLP06858 475 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 SLC2A1P11166 492 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 CD24P25063 80 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 MDH1P40925 334 aaKnown RBP6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 RPS27P42677 84 aaKnown RBP6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 MRPL19P49406 292 aaKnown RBP6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 PSMD7P51665 324 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 SLC18A1P54219 525 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 DLX6P56179 175 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 PRKCDQ05655 676 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 BLMHQ13867 455 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 NFYCQ13952 458 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 ZNF273Q14593 569 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 CYP51A1Q16850 503 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 RFX4Q33E94 735 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 KLHL12Q53G59 568 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 UNQ9370/PRO34162Q6UXP9 181 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 CCDC80Q76M96 950 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 OVCH2Q7RTZ1 564 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 OR2W3Q7Z3T1 314 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 PATL1Q86TB9 770 aaKnown RBP6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 OR6V1Q8N148 313 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 OR52H1Q8NGJ2 320 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 OR5K1Q8NHB7 308 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 PITX2Q99697 317 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 ATF6BQ99941 703 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 KAT8Q9H7Z6 458 aaKnown RBP6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 C14orf119Q9NWQ9 140 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 CCDC167Q9P0B6 97 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 RHCGQ9UBD6 479 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 CYB5R1Q9UHQ9 305 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 U3KQE9 123 aa6.72□□□□□ -1.33
HMGB1P39-201ENST00000366304 MEX3AA1L020 520 aaKnown RBP6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 J3KTA2 159 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 M0R135 149 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 XKRYO14609 159 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 PTP4A3O75365 173 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 E2F6O75461 281 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 CLIC3O95833 236 aa6.71□□□□□ -1.34
HMGB1P39-201ENST00000366304 OTX1P32242 354 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms