RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 VWA1Q6PCB0 445 aa9.69□□□□□ -0.86
CSNK1E-202ENST00000366216 DNM1P46Q6ZS02 220 aa9.69□□□□□ -0.86
CSNK1E-202ENST00000366216 FAM57BQ71RH2 274 aa9.69□□□□□ -0.86
CSNK1E-202ENST00000366216 DOK3Q7L591 496 aa9.69□□□□□ -0.86
CSNK1E-202ENST00000366216 FAM214BQ7L5A3 538 aa9.69□□□□□ -0.86
CSNK1E-202ENST00000366216 ZNF433Q8N7K0 673 aaPredicted RBP9.69□□□□□ -0.86
CSNK1E-202ENST00000366216 GDPD1Q8N9F7 314 aa9.69□□□□□ -0.86
CSNK1E-202ENST00000366216 PLPP7Q8NBV4 271 aa9.69□□□□□ -0.86
CSNK1E-202ENST00000366216 TRMT10AQ8TBZ6 339 aaKnown RBP9.69□□□□□ -0.86
CSNK1E-202ENST00000366216 ZNF799Q96GE5 643 aa9.69□□□□□ -0.86
CSNK1E-202ENST00000366216 PGAM5Q96HS1 289 aa9.69□□□□□ -0.86
CSNK1E-202ENST00000366216 SRRQ9GZT4 340 aa9.69□□□□□ -0.86
CSNK1E-202ENST00000366216 SHARPINQ9H0F6 387 aa9.69□□□□□ -0.86
CSNK1E-202ENST00000366216 WNT5BQ9H1J7 359 aa9.69□□□□□ -0.86
CSNK1E-202ENST00000366216 CYSLTR2Q9NS75 346 aa9.69□□□□□ -0.86
CSNK1E-202ENST00000366216 ANXA2P2A6NMY6 339 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 F5H5K5 113 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 PAHP00439 452 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 APOA1P02647 267 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 CRHP06850 196 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 SLC2A1P11166 492 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 ARR3P36575 388 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 DDOSTP39656 456 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 IFITM3Q01628 133 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 GLT8D1Q68CQ7 371 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 ZNF529Q6P280 563 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 ANKRD16Q6P6B7 361 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 CNIH2Q6PI25 160 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 FAM131AQ6UXB0 335 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 TFAP2EQ6VUC0 442 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 SERPINA12Q8IW75 414 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 UBE2J2Q8N2K1 259 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 NKAIN3Q8N8D7 197 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 CNEP1R1Q8N9A8 125 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 OR52H1Q8NGJ2 320 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 OR6K3Q8NGY3 331 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 FGFBP3Q8TAT2 258 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 ZNF671Q8TAW3 534 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 OR51E1Q8TCB6 317 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 C10orf35Q96D05 121 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 SDHCQ99643 169 aaPredicted RBP9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 OPN3Q9H1Y3 402 aaPredicted RBP9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 OR10A2Q9H208 303 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 C12orf49Q9H741 205 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 GPR84Q9NQS5 396 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 TAS2R4Q9NYW5 299 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 ZNF224Q9NZL3 707 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 ZNF319Q9P2F9 582 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 RABL2AQ9UBK7 228 aaPredicted RBP9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 PRSS50Q9UI38 385 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 RABL2BQ9UNT1 228 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 ETV7Q9Y603 341 aa9.68□□□□□ -0.86
CSNK1E-202ENST00000366216 A0A096LNT2 108 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 LOC390937A0A1W2PQ73 354 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 FAM25AB3EWG3 89 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 FAM25CB3EWG5 89 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 FAM25GB3EWG6 89 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 H3BSH0 61 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 TBX1O43435 398 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 UBL3O95164 117 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 CGAP01215 116 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 IGHV4-39P01824 125 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 MAS1P04201 325 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 ITGA5P08648 1049 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 PATE4P0C8F1 98 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 SNRPBP14678 240 aaKnown RBP9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 SRD5A1P18405 259 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 ELK1P19419 428 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 TALDO1P37837 337 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 HTR5AP47898 357 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 SLC6A9P48067 706 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 FOXG1P55316 489 aaPredicted RBP9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 RGS21Q2M5E4 152 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 TMEM249Q2WGJ8 235 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 PABPC1L2AQ5JQF8 200 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 HES5Q5TA89 166 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 TMEM53Q6P2H8 277 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 PGAP1Q75T13 922 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 LYSMD2Q8IV50 215 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 SAMD12Q8N8I0 201 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 MINDY2Q8NBR6 621 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 OR1K1Q8NGR3 316 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 OR1J2Q8NGS2 313 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 OR5H6Q8NGV6 325 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 OR14K1Q8NGZ2 314 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 AKR7LQ8NHP1 331 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 BCL2L2Q92843 193 aaPredicted RBP9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 FGGYQ96C11 551 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 FOXRED1Q96CU9 486 aaPredicted RBP9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 ADAT3Q96EY9 351 aaPredicted RBP9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 BOD1Q96IK1 185 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 TMEM204Q9BSN7 226 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 PPP1R3EQ9H7J1 279 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 RNF121Q9H920 327 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 STEAP1Q9UHE8 339 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 ZNF391Q9UJN7 358 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 V9GYS6 101 aa9.67□□□□□ -0.86
CSNK1E-202ENST00000366216 TRRAPQ9Y4A5 3859 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 DHRS7CA6NNS2 312 aa9.66□□□□□ -0.86
CSNK1E-202ENST00000366216 SLC17A2O00624 439 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms