RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 MRM1Q6IN84 353 aaKnown RBP16.58■□□□□ 0.24
CLIP2-202ENST00000361545 Q6ZNX1 250 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 OR13G1Q8NGZ3 307 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 OR2G3Q8NGZ4 309 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 RNF141Q8WVD5 230 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 GINS3Q9BRX5 216 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 SEC16AO15027 2179 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 F6UZH7 168 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 CDC42EP2O14613 210 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 M6PRP20645 277 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 DCTDP32321 178 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 SLC37A1P57057 533 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 TUSC5Q8IXB3 177 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 DDOQ99489 341 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 PCYT1BQ9Y5K3 369 aaPredicted RBP16.58■□□□□ 0.24
CLIP2-202ENST00000361545 GABRA1P14867 456 aa16.57■□□□□ 0.24
CLIP2-202ENST00000361545 SPINK2P20155 84 aa16.57■□□□□ 0.24
CLIP2-202ENST00000361545 SFT2D1Q8WV19 159 aa16.57■□□□□ 0.24
CLIP2-202ENST00000361545 CSAG2Q9Y5P2 127 aa16.57■□□□□ 0.24
CLIP2-202ENST00000361545 PIGPP57054 158 aa16.57■□□□□ 0.24
CLIP2-202ENST00000361545 PRDX4Q13162 271 aa16.57■□□□□ 0.24
CLIP2-202ENST00000361545 CDONQ4KMG0 1287 aa16.57■□□□□ 0.24
CLIP2-202ENST00000361545 UCK1Q9HA47 277 aa16.57■□□□□ 0.24
CLIP2-202ENST00000361545 NUP214P35658 2090 aaPredicted RBP16.57■□□□□ 0.24
CLIP2-202ENST00000361545 SNRPNP63162 240 aaKnown RBP16.57■□□□□ 0.24
CLIP2-202ENST00000361545 GUCA2AQ02747 115 aa16.57■□□□□ 0.24
CLIP2-202ENST00000361545 ZNF816Q0VGE8 651 aaPredicted RBP16.57■□□□□ 0.24
CLIP2-202ENST00000361545 HIST2H3PS2Q5TEC6 136 aa16.57■□□□□ 0.24
CLIP2-202ENST00000361545 KCNIP4Q6PIL6 250 aa16.57■□□□□ 0.24
CLIP2-202ENST00000361545 DYNC2LI1Q8TCX1 351 aa16.57■□□□□ 0.24
CLIP2-202ENST00000361545 CLPPQ16740 277 aaPredicted RBP16.57■□□□□ 0.24
CLIP2-202ENST00000361545 MAMSTRQ6ZN01 415 aa16.57■□□□□ 0.24
CLIP2-202ENST00000361545 SPSB1Q96BD6 273 aa16.57■□□□□ 0.24
CLIP2-202ENST00000361545 SLC26A1Q9H2B4 701 aa16.57■□□□□ 0.24
CLIP2-202ENST00000361545 SLC17A2O00624 439 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 ETFDHQ16134 617 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 CD276Q5ZPR3 534 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 CMBLQ96DG6 245 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 KLK11Q9UBX7 282 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 FUT3P21217 361 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 TSEN54Q7Z6J9 526 aaKnown RBP16.56■□□□□ 0.24
CLIP2-202ENST00000361545 C10orf90Q96M02 699 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 FOXJ3Q9UPW0 622 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 NCBP2LA6PVI3 153 aaKnown RBP16.56■□□□□ 0.24
CLIP2-202ENST00000361545 OR5G3P0C626 314 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 KLF3P57682 345 aaPredicted RBP16.56■□□□□ 0.24
CLIP2-202ENST00000361545 KISS1Q15726 138 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 RFESDQ8TAC1 157 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 RND1Q92730 232 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 YIPF6Q96EC8 236 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 TMEM30CPA0ZSE6 113 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 ERHP84090 104 aaKnown RBP16.56■□□□□ 0.24
CLIP2-202ENST00000361545 TNFAIP6P98066 277 aaPredicted RBP16.56■□□□□ 0.24
CLIP2-202ENST00000361545 SLC51BQ86UW2 128 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 PELI1Q96FA3 418 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 MAGT1Q9H0U3 335 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 ZNF705FA8MVS1 300 aaPredicted RBP16.56■□□□□ 0.24
CLIP2-202ENST00000361545 C3orf80F5H4A9 247 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 LRP3O75074 770 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 DHRS3O75911 302 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 FTH1P19P0C7X4 201 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 ZNF705DP0CH99 300 aaPredicted RBP16.56■□□□□ 0.24
CLIP2-202ENST00000361545 ZNF705BP0CI00 300 aaPredicted RBP16.56■□□□□ 0.24
CLIP2-202ENST00000361545 GNG10P50151 68 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 PPP1CBP62140 327 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 ZAR1Q86SH2 424 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 RTN4IP1Q8WWV3 396 aaPredicted RBP16.56■□□□□ 0.24
CLIP2-202ENST00000361545 TAF9BQ9HBM6 251 aa16.56■□□□□ 0.24
CLIP2-202ENST00000361545 SSX4O60224 188 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 ADRA2CP18825 462 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 TM4SF19Q96DZ7 209 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 ZFPL1O95159 310 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 BTG1P62324 171 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 OR4S1Q8NGB4 309 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 NPAP1Q9NZP6 1156 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 ZNF638Q14966 1978 aaKnown RBP16.55■□□□□ 0.24
CLIP2-202ENST00000361545 RPS10-NUDT3A0A1W2PQS6 291 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 FOXS1O43638 330 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 TBPP20226 339 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 RPS10P46783 165 aaKnown RBP16.55■□□□□ 0.24
CLIP2-202ENST00000361545 ZFP82Q8N141 532 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 GPX8Q8TED1 209 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 TAAR3PQ9P1P4 343 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 TRAV1-2A0A0B4J238 106 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 TCRBV16S1A1N1A0A5B0 115 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 DEFB108AA8MXU0 73 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 PCBP3P57721 371 aaKnown RBP16.55■□□□□ 0.24
CLIP2-202ENST00000361545 ASAH1Q13510 395 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 TMEM52Q8NDY8 209 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 SAMD10Q9BYL1 202 aa16.55■□□□□ 0.24
CLIP2-202ENST00000361545 MYOZ1Q9NP98 299 aaPredicted RBP16.55■□□□□ 0.24
CLIP2-202ENST00000361545 CD82P27701 267 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 PSMB3P49720 205 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 INSL4Q14641 139 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 ARHGEF39Q8N4T4 335 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 FBXW5Q969U6 566 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 ZNF251Q9BRH9 671 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 NTN1O95631 604 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 MAGEB1P43366 347 aa16.54■□□□□ 0.24
CLIP2-202ENST00000361545 TMEM182Q6ZP80 229 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms