RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 ABHD6Q9BV23 337 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 SMIM3Q9BZL3 60 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 OR52A1Q9UKL2 312 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 TP53TG5Q9Y2B4 290 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 MRPS2Q9Y399 296 aaKnown RBP13.22□□□□□ -0.29
UBAP1-202ENST00000359544 EMC9Q9Y3B6 208 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 FBXO7Q9Y3I1 522 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 PUS1Q9Y606 427 aaKnown RBP eCLIP13.22□□□□□ -0.29
UBAP1-202ENST00000359544 SPEGQ15772 3267 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 SPTBP11277 2137 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 TNFSF14O43557 240 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 GMFGO60234 142 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 EGR4Q05215 589 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 KIR2DS3Q14952 304 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 TCEAL6Q6IPX3 200 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 NPSR1Q6W5P4 371 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 PRSS41Q7RTY9 318 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 HIST3H2BBQ8N257 126 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 OR13C9Q8NGT0 318 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 RHBDD1Q8TEB9 315 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 TMEM68Q96MH6 324 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 MRPL22Q9NWU5 206 aaKnown RBP13.22□□□□□ -0.29
UBAP1-202ENST00000359544 FANCMQ8IYD8 2048 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 SCN2AQ99250 2005 aa13.22□□□□□ -0.29
UBAP1-202ENST00000359544 A0A087WWC5 75 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 PRSS37A4D1T9 235 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 OR5H15A6NDH6 313 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 OR5H1A6NKK0 313 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 ZNF726A6NNF4 738 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 SRSF10O75494 262 aaKnown RBP13.21□□□□□ -0.29
UBAP1-202ENST00000359544 PTBP3O95758 552 aaKnown RBP13.21□□□□□ -0.29
UBAP1-202ENST00000359544 PRH1P02810 166 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 CEACAM5P06731 702 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 PI3P19957 117 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 CRABP1P29762 137 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 CCR4P51679 360 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 EMP2P54851 167 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 SPEM2Q0P670 501 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 FOXO1Q12778 655 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 METTL21AQ8WXB1 218 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 OR11A1Q9GZK7 315 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 SMOC1Q9H4F8 434 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 ZDHHC8Q9ULC8 765 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 MMP24Q9Y5R2 645 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 PTPRZ1P23471 2315 aaPredicted RBP13.21□□□□□ -0.29
UBAP1-202ENST00000359544 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 A0A1B0GWJ7 208 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 RBMXP38159 391 aaKnown RBP13.21□□□□□ -0.29
UBAP1-202ENST00000359544 NBL1P41271 181 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 UBE2V2Q15819 145 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 OTPQ5XKR4 325 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 FIGLAQ6QHK4 219 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 LHFPL1Q86WI0 220 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 OR5R1Q8NH85 324 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 EMG1Q92979 244 aaKnown RBP13.21□□□□□ -0.29
UBAP1-202ENST00000359544 FAM122AQ96E09 287 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 KTI12Q96EK9 354 aaPredicted RBP13.21□□□□□ -0.29
UBAP1-202ENST00000359544 FOXN4Q96NZ1 517 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 NEU1Q99519 415 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 GINS3Q9BRX5 216 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 TGIF2Q9GZN2 237 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 G6PC2Q9NQR9 355 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 TUBD1Q9UJT1 453 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 SLC5A6Q9Y289 635 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 SLC17A4Q9Y2C5 497 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 ZNF292O60281 2723 aa13.21□□□□□ -0.29
UBAP1-202ENST00000359544 MKRN2OSH3BPM6 223 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 SLC16A7O60669 478 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 HIST1H2BKO60814 126 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 HIST1H2BJP06899 126 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 PAX1P15863 534 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 HIST1H2BOP23527 126 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 HIST1H2BBP33778 126 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 RAB38P57729 211 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 HIST1H2BDP58876 126 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 LSM6P62312 80 aaKnown RBP13.2□□□□□ -0.3
UBAP1-202ENST00000359544 HIST1H2BCP62807 126 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 HIST2H2BEQ16778 126 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.2□□□□□ -0.3
UBAP1-202ENST00000359544 SPNS3Q6ZMD2 512 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 BCORP1Q8N888 145 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 CCDC54Q8NEL0 328 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 OR9A4Q8NGU2 314 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 MFSD8Q8NHS3 518 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 FNDC9Q8TBE3 224 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 HIST1H2BHQ93079 126 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 NTNG2Q96CW9 530 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 SPACA7Q96KW9 195 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 HIST1H2BNQ99877 126 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 HIST1H2BMQ99879 126 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 ZFYVE21Q9BQ24 234 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 MUC22E2RYF6 1773 aaPredicted RBP13.2□□□□□ -0.3
UBAP1-202ENST00000359544 DCHS1Q96JQ0 3298 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 TMEM14DPA8MWL7 114 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 RPS2P15880 293 aaKnown RBP13.2□□□□□ -0.3
UBAP1-202ENST00000359544 LMO1P25800 156 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 RELQ04864 619 aaPredicted RBP13.2□□□□□ -0.3
UBAP1-202ENST00000359544 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBAP1-202ENST00000359544 KHDC3LQ587J8 217 aa13.2□□□□□ -0.3
UBAP1-202ENST00000359544 WDR5BQ86VZ2 330 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms