RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 OR5C1Q8NGR4 320 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 RIMS4Q9H426 269 aaPredicted RBP7.93□□□□□ -1.14
COL6A6-201ENST00000358511 TMEM9BQ9NQ34 198 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 RALYQ9UKM9 306 aaKnown RBP7.93□□□□□ -1.14
COL6A6-201ENST00000358511 SSUH2Q9Y2M2 353 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 ANKRD20A5PA0PJZ0 165 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 AMTP48728 403 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 IL10RAQ13651 578 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 FAM26DQ5JW98 314 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 SLC39A5Q6ZMH5 540 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 CAMKMTQ7Z624 323 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 IFI44Q8TCB0 444 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 TMPRSS13Q9BYE2 586 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 FAM117AQ9C073 453 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 NYNRINQ9P2P1 1898 aaKnown RBP7.93□□□□□ -1.14
COL6A6-201ENST00000358511 TMEM272A0A1B0GTI8 110 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 M0R1X1 148 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 RPL34P49207 117 aaKnown RBP7.93□□□□□ -1.14
COL6A6-201ENST00000358511 RPL18Q07020 188 aaKnown RBP7.93□□□□□ -1.14
COL6A6-201ENST00000358511 OR2T10Q8NGZ9 312 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 Q9N2K0 584 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 DNMT3BQ9UBC3 853 aaKnown RBP7.93□□□□□ -1.14
COL6A6-201ENST00000358511 EXOGQ9Y2C4 368 aaKnown RBP7.93□□□□□ -1.14
COL6A6-201ENST00000358511 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.93□□□□□ -1.14
COL6A6-201ENST00000358511 FKBP2P26885 142 aaKnown RBP7.93□□□□□ -1.14
COL6A6-201ENST00000358511 OPRM1P35372 400 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 UQCRFS1P47985 274 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 GNG4P50150 75 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 BTG2P78543 158 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 Q7L0L9 218 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 OR51E1Q8TCB6 317 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 S1PR5Q9H228 398 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 A4GNTQ9UNA3 340 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 SUB1P53999 127 aaKnown RBP eCLIP7.92□□□□□ -1.14
COL6A6-201ENST00000358511 RAC1P63000 192 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 INSL4Q14641 139 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 ZNF542PQ5EBM4 170 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 Q6ZSR6 202 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 TOE1Q96GM8 510 aaKnown RBP7.92□□□□□ -1.14
COL6A6-201ENST00000358511 P4HTMQ9NXG6 502 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 HEPACAM2A8MVW5 462 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 TCF21O43680 179 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 IGHA2P01877 340 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 STAG3L2P0CL84 134 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 ACRP10323 421 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 MAT1AQ00266 395 aaKnown RBP7.92□□□□□ -1.14
COL6A6-201ENST00000358511 ZNF385BQ569K4 471 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 LRP11Q86VZ4 500 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 C19orf47Q8N9M1 422 aaKnown RBP7.92□□□□□ -1.14
COL6A6-201ENST00000358511 IL22RA2Q969J5 263 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 SHARPINQ9H0F6 387 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 TMEM202A6NGA9 273 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 GPANK1O95872 356 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 FBP1P09467 338 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 CD96P40200 585 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 PTGFRP43088 359 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 VHLLQ6RSH7 139 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 SLC26A10Q8NG04 563 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 SMDT1Q9H4I9 107 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 FBXL17Q9UF56 701 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 IL17BQ9UHF5 180 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 A6NDN8 102 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 MRPL33O75394 65 aaKnown RBP7.92□□□□□ -1.14
COL6A6-201ENST00000358511 IGF2P01344 180 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 ZNF79Q15937 498 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 LINC00597Q9H2U6 94 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 ZNF275Q9NSD4 429 aaPredicted RBP7.92□□□□□ -1.14
COL6A6-201ENST00000358511 SLCO1B1Q9Y6L6 691 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 ZNF737O75373 536 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 ZFPL1O95159 310 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 TRIM61Q5EBN2 209 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 RNASEKQ6P5S7 137 aaKnown RBP7.92□□□□□ -1.14
COL6A6-201ENST00000358511 VWA1Q6PCB0 445 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 ERGIC1Q969X5 290 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 TRIB1Q96RU8 372 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 ADAMTS5Q9UNA0 930 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 C7orf77A4D0Y5 90 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 PRAMEF26H0Y7S4 382 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 TNFRSF10CO14798 259 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 HLA-DRB3P79483 266 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 ZNF750Q32MQ0 723 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 FAM74A3Q4VXF1 159 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 FKBP11Q9NYL4 201 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 ZNF107Q9UII5 783 aaPredicted RBP7.92□□□□□ -1.14
COL6A6-201ENST00000358511 DMRT1Q9Y5R6 373 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 CST7O76096 145 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 APOBEC1P41238 236 aaKnown RBP7.92□□□□□ -1.14
COL6A6-201ENST00000358511 SLC35E1Q96K37 410 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 FAM234AQ9H0X4 552 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 ZGRF1Q86YA3 2104 aa7.92□□□□□ -1.14
COL6A6-201ENST00000358511 C4orf47A7E2U8 309 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 HS3ST1O14792 307 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 CSN1S1P47710 185 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 LGALS4P56470 323 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 GNB2P62879 340 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 MS4A6EQ96DS6 147 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 NAT8Q9UHE5 227 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 PPP1R3CQ9UQK1 317 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 A0A1W2PR48 441 aa7.91□□□□□ -1.14
COL6A6-201ENST00000358511 IAPPP10997 89 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms