RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 APOBEC4Q8WW27 367 aaKnown RBP6.56□□□□□ -1.36
VPS13A-202ENST00000357409 OR52A5Q9H2C5 316 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 UFC1Q9Y3C8 167 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 TRGV10A0A0A0MS01 117 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 PMCHP20382 165 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 LHX2P50458 406 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 ZNF117Q03924 483 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 MRPL58Q14197 206 aaKnown RBP6.56□□□□□ -1.36
VPS13A-202ENST00000357409 ZNF528Q3MIS6 628 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 LHFPL2Q6ZUX7 228 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 TSEN54Q7Z6J9 526 aaKnown RBP6.56□□□□□ -1.36
VPS13A-202ENST00000357409 CPEB3Q8NE35 698 aaKnown RBP6.56□□□□□ -1.36
VPS13A-202ENST00000357409 DTD1Q8TEA8 209 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 CABLES2Q9BTV7 478 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 RAB22AQ9UL26 194 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 BMP2P12643 396 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 COX6B1P14854 86 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 ETV6P41212 452 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 ZNF137PP52743 207 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 CLDN20P56880 219 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 AESQ08117 197 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 ZNF573Q86YE8 665 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 CMTM4Q8IZR5 234 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 OPALINQ96PE5 141 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 TGOLN2O43493 480 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 PF4V1P10720 104 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 CPN1P15169 458 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 GLDNQ6ZMI3 551 aaPredicted RBP6.56□□□□□ -1.36
VPS13A-202ENST00000357409 PLPP6Q8IY26 295 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 DYNLRB2Q8TF09 96 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 ZNF331Q9NQX6 463 aaPredicted RBP6.56□□□□□ -1.36
VPS13A-202ENST00000357409 ARG1P05089 322 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 ERVS71-1P61550 626 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 ZNF90Q03938 601 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 RELAQ04206 551 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 FOXO1Q12778 655 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 SAXO2Q658L1 398 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 ASB13Q8WXK3 278 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 KIRREL1Q96J84 757 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 ADGRG7Q96K78 797 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 P2RX4Q99571 388 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 PKMYT1Q99640 499 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 AFDNP55196 1824 aaKnown RBP6.56□□□□□ -1.36
VPS13A-202ENST00000357409 NUMA1Q14980 2115 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 IGHV5-10-1A0A0J9YXX1 117 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 CLEC18AA5D8T8 446 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 C17orf51A8MQB3 221 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 ARRB2P32121 409 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 FABP9Q0Z7S8 132 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 SSPNQ14714 243 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 RTL8BQ17RB0 113 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 TFAP2EQ6VUC0 442 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 CLEC18CQ8NCF0 446 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 OR4B1Q8NGF8 309 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 C14orf79Q96F83 325 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 TXN2Q99757 166 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 TRAV17A0A0B4J275 112 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 NID1P14543 1247 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 SUB1P53999 127 aaKnown RBP eCLIP6.56□□□□□ -1.36
VPS13A-202ENST00000357409 SNX22Q96L94 193 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 LRRC3BQ96PB8 259 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 HDHD3Q9BSH5 251 aaPredicted RBP6.56□□□□□ -1.36
VPS13A-202ENST00000357409 HES4Q9HCC6 221 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 B9D1Q9UPM9 204 aa6.56□□□□□ -1.36
VPS13A-202ENST00000357409 FAM24AA6NFZ4 105 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 SIGLEC5O15389 551 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 PLAUP00749 431 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 CD3EP07766 207 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 SIGLEC14Q08ET2 396 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 OR5H6Q8NGV6 325 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 SEH1LQ96EE3 360 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 VSTM2LQ96N03 204 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 OR2D2Q9H210 308 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 BAZ2AQ9UIF9 1905 aaKnown RBP6.55□□□□□ -1.36
VPS13A-202ENST00000357409 OR6C68A6NDL8 312 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 CRYABP02511 175 aaKnown RBP6.55□□□□□ -1.36
VPS13A-202ENST00000357409 TAS2R31P59538 309 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 XKR7Q5GH72 579 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 RFLNBQ8N5W9 214 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 SLC38A9Q8NBW4 561 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 DDOQ99489 341 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 RABL2AQ9UBK7 228 aaPredicted RBP6.55□□□□□ -1.36
VPS13A-202ENST00000357409 RABL2BQ9UNT1 228 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 INSIG2Q9Y5U4 225 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 FRG2CA6NGY1 282 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 FAM3AP98173 230 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 C4orf45Q96LM5 186 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 PDFQ9HBH1 243 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 PPLO60437 1756 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 LRP6O75581 1613 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 AQP8O94778 261 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 MORN4Q8NDC4 146 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 LILRB1Q8NHL6 650 aaPredicted RBP6.55□□□□□ -1.36
VPS13A-202ENST00000357409 ZNF707Q96C28 371 aaPredicted RBP6.55□□□□□ -1.36
VPS13A-202ENST00000357409 ZNF764Q96H86 408 aaPredicted RBP6.55□□□□□ -1.36
VPS13A-202ENST00000357409 SOSTQ9BQB4 213 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 LMO7DNF2Z398 122 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 H3BTX0 84 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 ZNF841Q6ZN19 808 aa6.55□□□□□ -1.36
VPS13A-202ENST00000357409 ZNF826PQ6ZT77 177 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms