RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 ONECUT1Q9UBC0 465 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 PLEKHB1Q9UF11 243 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-201ENST00000355497 MYH1P12882 1939 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 HIST1H3AP68431 136 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 TOMM34Q15785 309 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-201ENST00000355497 TCTN3Q6NUS6 607 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 PATE1Q8WXA2 126 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 SARGQ9BW04 601 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 NAT8BQ9UHF3 227 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 LINC01553A4QN01 128 aa13.4□□□□□ -0.27
LMX1B-201ENST00000355497 OR5AL1P0C617 328 aa13.4□□□□□ -0.27
LMX1B-201ENST00000355497 CCR5P51681 352 aa13.4□□□□□ -0.27
LMX1B-201ENST00000355497 ZNF154Q13106 437 aa13.4□□□□□ -0.27
LMX1B-201ENST00000355497 OTPQ5XKR4 325 aa13.4□□□□□ -0.27
LMX1B-201ENST00000355497 ANKRD34AQ69YU3 496 aa13.4□□□□□ -0.27
LMX1B-201ENST00000355497 OR10V1Q8NGI7 309 aa13.4□□□□□ -0.27
LMX1B-201ENST00000355497 ORAI1Q96D31 301 aa13.4□□□□□ -0.27
LMX1B-201ENST00000355497 UQCC1Q9NVA1 299 aa13.4□□□□□ -0.27
LMX1B-201ENST00000355497 TRGV8A0A0C4DH27 118 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 PYCARD-AS1I3L0S3 204 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 RPEL1Q2QD12 228 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 MAMSTRQ6ZN01 415 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 ARRDC1Q8N5I2 433 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 NTNG2Q96CW9 530 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 M0R1X1 148 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 SPNP16150 400 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 PPP2CAP67775 309 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 AQP6Q13520 282 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 TMEM183BQ1AE95 376 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 BTNL3Q6UXE8 466 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 CST4P01036 141 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 ZGLP1P0C6A0 271 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 CDAP32320 146 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 ZBTB37Q5TC79 503 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 TMEM179BQ7Z7N9 219 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 TCTEX1D1Q8N7M0 179 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 MISP3Q96FF7 219 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 ASB16Q96NS5 453 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 DERL3Q96Q80 235 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 OCEL1Q9H607 264 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 LTB4R2Q9NPC1 389 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 CHD2O14647 1828 aaKnown RBP13.39□□□□□ -0.27
LMX1B-201ENST00000355497 CBR3O75828 277 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 GPANK1O95872 356 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 SPATA46Q5T0L3 261 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 PRRX2Q99811 253 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 OR1A1Q9P1Q5 309 aa13.39□□□□□ -0.27
LMX1B-201ENST00000355497 F5H697 171 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 SLC17A2O00624 439 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 KLK8O60259 260 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 EPHA2P29317 976 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 Q8IYB0 196 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 PP6455Q8WZ26 134 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 GPR137Q96N19 417 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 GSX1Q9H4S2 264 aaPredicted RBP13.38□□□□□ -0.27
LMX1B-201ENST00000355497 IFT22Q9H7X7 185 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 A0A1W2PNV4 684 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 HMX2A2RU54 273 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 FUT3P21217 361 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 GNG4P50150 75 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 AP5S1Q9NUS5 200 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 MASP2O00187 686 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 SPRY3O43610 288 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 OPRK1P41145 380 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 DSCR4P56555 118 aaPredicted RBP13.38□□□□□ -0.27
LMX1B-201ENST00000355497 IGFBP7Q16270 282 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 PLA1AQ53H76 456 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 ACSM6Q6P461 480 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 ADAT1Q9BUB4 502 aaKnown RBP13.38□□□□□ -0.27
LMX1B-201ENST00000355497 POMT2Q9UKY4 750 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 ZDHHC22Q8N966 263 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 OR10D4PQ8NGN7 298 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 OR1F12Q8NHA8 337 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 TMEM37Q8WXS4 190 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 PLSCR3Q9NRY6 295 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 LRP12Q9Y561 859 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 C11orf91Q3C1V1 193 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 OR2W3Q7Z3T1 314 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 CHAC2Q8WUX2 184 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 SLC45A2Q9UMX9 530 aa13.38□□□□□ -0.27
LMX1B-201ENST00000355497 MYO10Q9HD67 2058 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 POM121BA6NF01 834 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 HELTA6NFD8 242 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 LIMK1P53667 647 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 SPCS3P61009 180 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 KMT5CQ86Y97 462 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 PTOV1Q86YD1 416 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 ANKRD53Q8N9V6 530 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 SLC2A9Q9NRM0 540 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 PRKNO60260 465 aaPredicted RBP13.37□□□□□ -0.27
LMX1B-201ENST00000355497 TMEM241Q24JQ0 296 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 CLLU1Q5K131 121 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 KIAA1324LA8MWY0 1029 aaPredicted RBP13.37□□□□□ -0.27
LMX1B-201ENST00000355497 TNFSF15O95150 251 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 HMGA1P17096 107 aaKnown RBP13.37□□□□□ -0.27
LMX1B-201ENST00000355497 TNFRSF1AP19438 455 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 AVPR2P30518 371 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 HTRA3P83110 453 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 SLC38A11Q08AI6 406 aa13.37□□□□□ -0.27
LMX1B-201ENST00000355497 PRSS36Q5K4E3 855 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms