RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 WDSUB1Q8N9V3 476 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 C12orf57Q99622 126 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 HINT2Q9BX68 163 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 ZFP64Q9NPA5 681 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 GDF2Q9UK05 429 aaPredicted RBP11.01□□□□□ -0.65
COLCA1-201ENST00000355430 PTP4A3O75365 173 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 TBPP20226 339 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 MNX1P50219 401 aaPredicted RBP11.01□□□□□ -0.65
COLCA1-201ENST00000355430 MESTQ5EB52 335 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 PSMF1Q92530 271 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 RND1Q92730 232 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 C2orf50Q96LR7 162 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 FAM60AQ9NP50 221 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 TIMM10BQ9Y5J6 103 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 GREB1Q4ZG55 1949 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 TRAV8-7A0A075B6U6 113 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 DCTN6O00399 190 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 SHOXO15266 292 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 ERGP11308 486 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 CDAP32320 146 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 IDH3GP51553 393 aaPredicted RBP11□□□□□ -0.65
COLCA1-201ENST00000355430 RNPS1Q15287 305 aaKnown RBP11□□□□□ -0.65
COLCA1-201ENST00000355430 BVESQ8NE79 360 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 OR6K3Q8NGY3 331 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 OR10AC1Q8NH08 325 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 INTS12Q96CB8 462 aaKnown RBP11□□□□□ -0.65
COLCA1-201ENST00000355430 ZNF75AQ96N20 296 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 OXGR1Q96P68 337 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 SPACA1Q9HBV2 294 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 MGAMO43451 1857 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 MPZL1O95297 269 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 Q5BKY6 102 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 DNASE2BQ8WZ79 361 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 DDA1Q9BW61 102 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 ANKUB1A6NFN9 424 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 SHISA8B8ZZ34 492 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 RPA2P15927 270 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 SCAND1P57086 179 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 ZNF121P58317 390 aaPredicted RBP11□□□□□ -0.65
COLCA1-201ENST00000355430 ADAM5Q6NVV9 412 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 ASB5Q8WWX0 329 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 OPN4Q9UHM6 478 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 ANKRD36A6QL64 1941 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 C9orf170A2RU37 121 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 SLC34A2O95436 690 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 CEACAM1P13688 526 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 CXCL2P19875 107 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 MSR1P21757 451 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 TRPM6Q9BX84 2022 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 CHD5Q8TDI0 1954 aa11□□□□□ -0.65
COLCA1-201ENST00000355430 SHISA3A0PJX4 238 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 CYR61O00622 381 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 IL2RGP31785 369 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 NDUFA6P56556 154 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 NANOS3P60323 173 aaKnown RBP10.99□□□□□ -0.65
COLCA1-201ENST00000355430 FOXF1Q12946 379 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 CD226Q15762 336 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 LGI3Q8N145 548 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 PLPP5Q8NEB5 264 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 TERB2Q8NHR7 220 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 FBXW5Q969U6 566 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 PURGQ9UJV8 347 aaKnown RBP10.99□□□□□ -0.65
COLCA1-201ENST00000355430 FBXO7Q9Y3I1 522 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 JTBO76095 146 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 ETFDHQ16134 617 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 GVQW1Q8N7I0 195 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 SEMA6DQ8NFY4 1073 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 OR11H4Q8NGC9 324 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 PGLYRP3Q96LB9 341 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 PRELID3BQ9Y3B1 194 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 B3GALNT1O75752 331 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 BMP5P22003 454 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 AKR1C3P42330 323 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 IKZF1Q13422 519 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.99□□□□□ -0.65
COLCA1-201ENST00000355430 TMEM65Q6PI78 240 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 UQCC3Q6UW78 93 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 HSD17B13Q7Z5P4 300 aaPredicted RBP10.99□□□□□ -0.65
COLCA1-201ENST00000355430 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.99□□□□□ -0.65
COLCA1-201ENST00000355430 ZDHHC22Q8N966 263 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 OR51A4Q8NGJ6 313 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 RHOFQ9HBH0 211 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 NIT2Q9NQR4 276 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 ZNF354AO60765 605 aaPredicted RBP10.99□□□□□ -0.65
COLCA1-201ENST00000355430 NXPH2O95156 264 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 LTBRP36941 435 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 EFNB2P52799 333 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 TMEM128Q5BJH2 165 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 SLC38A9Q8NBW4 561 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 OR13C8Q8NGS7 320 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 EMG1Q92979 244 aaKnown RBP10.99□□□□□ -0.65
COLCA1-201ENST00000355430 VSTM2LQ96N03 204 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 ESRP2Q9H6T0 727 aaKnown RBP10.99□□□□□ -0.65
COLCA1-201ENST00000355430 A0A0B4J293 547 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 FAM221AA4D161 298 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 HSD17B6O14756 317 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 GSTP1P09211 210 aaKnown RBP10.99□□□□□ -0.65
COLCA1-201ENST00000355430 CTLA4P16410 223 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 OPRM1P35372 400 aa10.99□□□□□ -0.65
COLCA1-201ENST00000355430 TAGLN2P37802 199 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms