RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 TMEM225BP0DP42 221 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 LUMP51884 338 aaPredicted RBP12.22□□□□□ -0.45
TRIM4-201ENST00000349062 SNAI3Q3KNW1 292 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 FBXO17Q96EF6 278 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 ZNF799Q96GE5 643 aa12.22□□□□□ -0.45
TRIM4-201ENST00000349062 NPDC1Q9NQX5 325 aaPredicted RBP12.22□□□□□ -0.45
TRIM4-201ENST00000349062 CADP27708 2225 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 GSTZ1O43708 216 aaPredicted RBP12.21□□□□□ -0.45
TRIM4-201ENST00000349062 ATG12O94817 140 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 CD59P13987 128 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 RAC1P63000 192 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 RHOUQ7L0Q8 258 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 LINC00518Q8N0U6 118 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 DEFB124Q8NES8 71 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 OR51T1Q8NGJ9 327 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 FNDC9Q8TBE3 224 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 ZNF701Q9NV72 531 aaPredicted RBP12.21□□□□□ -0.45
TRIM4-201ENST00000349062 EXPH5Q8NEV8 1989 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 CACNA1DQ01668 2161 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 A0A1W2PNV4 684 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 MEGF11A6BM72 1044 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 DKK1O94907 266 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 F12P00748 615 aaPredicted RBP12.21□□□□□ -0.45
TRIM4-201ENST00000349062 ACP1P24666 158 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 UNC119Q13432 240 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 UNQ6126/PRO20091Q6UXV3 157 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 SLC22A24Q8N4F4 322 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 PXT1Q8NFP0 134 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 OR1S1Q8NH92 325 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 SLC25A28Q96A46 364 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 CPNE2Q96FN4 548 aaPredicted RBP12.21□□□□□ -0.45
TRIM4-201ENST00000349062 SGCZQ96LD1 299 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 ZNF75AQ96N20 296 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 OPN4Q9UHM6 478 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 KLK13Q9UKR3 277 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 NOP16Q9Y3C1 178 aaKnown RBP12.21□□□□□ -0.45
TRIM4-201ENST00000349062 RHBDD3Q9Y3P4 386 aa12.21□□□□□ -0.45
TRIM4-201ENST00000349062 C3orf80F5H4A9 247 aa12.21□□□□□ -0.46
TRIM4-201ENST00000349062 GPR31O00270 319 aa12.21□□□□□ -0.46
TRIM4-201ENST00000349062 SSPNQ14714 243 aa12.21□□□□□ -0.46
TRIM4-201ENST00000349062 RNASE10Q5GAN6 216 aaKnown RBP12.21□□□□□ -0.46
TRIM4-201ENST00000349062 ZNF660Q6AZW8 331 aaPredicted RBP12.21□□□□□ -0.46
TRIM4-201ENST00000349062 HAGHLQ6PII5 290 aaPredicted RBP12.21□□□□□ -0.46
TRIM4-201ENST00000349062 OR2AK2Q8NG84 335 aa12.21□□□□□ -0.46
TRIM4-201ENST00000349062 C12orf57Q99622 126 aa12.21□□□□□ -0.46
TRIM4-201ENST00000349062 UTP23Q9BRU9 249 aaKnown RBP12.21□□□□□ -0.46
TRIM4-201ENST00000349062 A0A1B0GTI1 187 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 A0A1W2PR80 420 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 GLI4P10075 376 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 ZNF32P17041 273 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 HRH1P35367 487 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 FOXG1P55316 489 aaPredicted RBP12.2□□□□□ -0.46
TRIM4-201ENST00000349062 RAG2P55895 527 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 OR1C1Q15619 314 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 SLC16A14Q7RTX9 510 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 GJC3Q8NFK1 279 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 BPIFCQ8NFQ6 507 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 FGFBP3Q8TAT2 258 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 MRPS24Q96EL2 167 aaKnown RBP12.2□□□□□ -0.46
TRIM4-201ENST00000349062 IER2Q9BTL4 223 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 NELFAQ9H3P2 528 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 TMEM231Q9H6L2 316 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 ASF1BQ9NVP2 202 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 ATPIF1Q9UII2 106 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 SGCEO43556 437 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 EIF1BO60739 113 aaKnown RBP12.2□□□□□ -0.46
TRIM4-201ENST00000349062 SRSF10O75494 262 aaKnown RBP12.2□□□□□ -0.46
TRIM4-201ENST00000349062 CSF1P09603 554 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 PMP22Q01453 160 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 RBMS2Q15434 407 aaKnown RBP12.2□□□□□ -0.46
TRIM4-201ENST00000349062 ZNF626Q68DY1 528 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 FDX2Q6P4F2 183 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 ZNF813Q6ZN06 617 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 ARMC10Q8N2F6 343 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 CLRN3Q8NCR9 226 aa12.2□□□□□ -0.46
TRIM4-201ENST00000349062 C13orf42A0A1B0GVH6 325 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 CD79AP11912 226 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 CASRP41180 1078 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 PDSS1Q5T2R2 415 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 TFAP2EQ6VUC0 442 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 CDH26Q8IXH8 852 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 ZIC4Q8N9L1 334 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 NCKAP5O14513 1909 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 CTDSPLO15194 276 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 SULT1B1O43704 296 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 SERPINA7P05543 415 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 RAB12Q6IQ22 244 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 CBLN2Q8IUK8 224 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 WBP1Q96G27 269 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 TMEM59Q9BXS4 323 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 NKX6-2Q9C056 277 aaPredicted RBP12.19□□□□□ -0.46
TRIM4-201ENST00000349062 COMMD9Q9P000 198 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 CSAG2Q9Y5P2 127 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 LRRC3CA6NJW4 275 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 A8MXK9 166 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 NDUFB6O95139 128 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 HLA-HP01893 362 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 NAT2P11245 290 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 CCL11P51671 97 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 ENDOGQ14249 297 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms