RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SMOC1Q9H4F8 434 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 CNTD2Q9H8S5 307 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 LRIT1Q9P2V4 623 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 HEATR5AQ86XA9 2040 aa9.15□□□□□ -0.94
CHRNA1-202ENST00000348749 KIR2DS5A0A0G2JLQ3 304 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 A0A0G2JNG1 304 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 SMCO3A2RU48 225 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 KIR2DS3K7RE56 304 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 HEXBP07686 556 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 GSTP1P09211 210 aaKnown RBP9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 P2RY1P47900 373 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 ERVFRD-1P60508 538 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 ZNF117Q03924 483 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 TNFRSF9Q07011 255 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 RPL18Q07020 188 aaKnown RBP9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 KIR2DS5Q14953 304 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 TANGO2Q6ICL3 276 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 OR2T2Q6IF00 324 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 OR4C3Q8NH37 302 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 METTL21AQ8WXB1 218 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 C8orf44Q96CB5 159 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 RAB39BQ96DA2 213 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 RCC1LQ96I51 464 aaKnown RBP9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 SPACA7Q96KW9 195 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 OR11A1Q9GZK7 315 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 OR10A5Q9H207 317 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 S1PR5Q9H228 398 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 CAPN10Q9HC96 672 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 HS3ST3B1Q9Y662 390 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 SLCO1B1Q9Y6L6 691 aa9.15□□□□□ -0.95
CHRNA1-202ENST00000348749 TMEM269A0A1B0GVZ9 245 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 ZNF727A8MUV8 499 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 H3BQ15 152 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 IL33O95760 270 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 MT-ATP6P00846 226 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 TRGC2P03986 189 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 CHRM2P08172 466 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 SPARCP09486 303 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 TRGC1P0CF51 173 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 VSIG8P0DPA2 414 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 NTSR1P30989 418 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 TAGLN2P37802 199 aaKnown RBP9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 HSD17B7P56937 341 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 IAH1Q2TAA2 248 aaPredicted RBP9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 PRTGQ2VWP7 1150 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 AKR1C8PQ5T2L2 129 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 SLC35D2Q76EJ3 337 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 OR8G5Q8NG78 346 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 OR13C9Q8NGT0 318 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 C16orf52Q8NHV5 167 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 ERGIC1Q969X5 290 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 HIST1H2BLQ99880 126 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 SMIM3Q9BZL3 60 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 ACTR3CQ9C0K3 210 aaPredicted RBP9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 PRTFDC1Q9NRG1 225 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 C1orf123Q9NWV4 160 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 HRASLS2Q9NWW9 162 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 B9D1Q9UPM9 204 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 OSGIN2Q9Y236 505 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 R4GMQ9 66 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 LRP4O75096 1905 aa9.14□□□□□ -0.95
CHRNA1-202ENST00000348749 LOC107986453A0A1B0GWG9 222 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 TMEM14DPA8MWL7 114 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 K7N7A8 449 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 SCDO00767 359 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 XKRYO14609 159 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 HNRNPA2B1P22626 353 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 GLIPR1P48060 266 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 DHPSP49366 369 aaPredicted RBP9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 AFF3P51826 1226 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 SEC13P55735 322 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 UBE2KP61086 200 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 EGR4Q05215 589 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 PDZD11Q5EBL8 140 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 GGNBP1Q5YKI7 109 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 ZNF343Q6P1L6 599 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 FOXRED2Q8IWF2 684 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 SLC22A24Q8N4F4 322 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 MFSD8Q8NHS3 518 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 ABHD5Q8WTS1 349 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 EMG1Q92979 244 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 ELSPBP1Q96BH3 223 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 R3HDM4Q96D70 268 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 VSX1Q9NZR4 365 aaPredicted RBP9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 LRP12Q9Y561 859 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 PIAS3Q9Y6X2 628 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 MPDZO75970 2070 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 TGIF2-C20orf24A0A0A6YYL0 155 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 LINC01553A4QN01 128 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 MARCH11A6NNE9 402 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 K7EQS6 105 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 HSD17B6O14756 317 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 CYB5BO43169 146 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 NSA2O95478 260 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 IGHMP01871 453 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 CRYABP02511 175 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 PRH1P02810 166 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 SNRPCP09234 159 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 PVRP15151 417 aa9.13□□□□□ -0.95
CHRNA1-202ENST00000348749 PI3P19957 117 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms