RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 SLC22A24Q8N4F4 322 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 KCNRGQ8N5I3 272 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 BPIFCQ8NFQ6 507 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 OR1S2Q8NGQ3 325 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 OR4K15Q8NH41 348 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 MRGPRX4Q96LA9 322 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 IMMP1LQ96LU5 166 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 JSRP1Q96MG2 331 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-201ENST00000347613 CDX2Q99626 313 aaPredicted RBP5.29□□□□□ -1.56
CLCN3-201ENST00000347613 SLC2A8Q9NY64 477 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 RFNGQ9Y644 331 aa5.29□□□□□ -1.56
CLCN3-201ENST00000347613 FAM186AA6NE01 2351 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF878C9JN71 531 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF587BE7ETH6 402 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 STMND1H3BQB6 276 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 CRTAPO75718 401 aaPredicted RBP5.28□□□□□ -1.56
CLCN3-201ENST00000347613 PLATP00750 562 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 RAB6AP20340 208 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 PRKACBP22694 351 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 FAUP35544 74 aaKnown RBP5.28□□□□□ -1.56
CLCN3-201ENST00000347613 PLA2G5P39877 138 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 FOXG1P55316 489 aaPredicted RBP5.28□□□□□ -1.56
CLCN3-201ENST00000347613 GPR85P60893 370 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 KISS1Q15726 138 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 MPPED2Q15777 294 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 RNASE10Q5GAN6 216 aaKnown RBP5.28□□□□□ -1.56
CLCN3-201ENST00000347613 DEGS2Q6QHC5 323 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 MOB3CQ70IA8 216 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 TMEM123Q8N131 208 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 OR6X1Q8NH79 312 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 SH2D2AQ9NP31 389 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 DEPPQ9NTK1 212 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 PILRBQ9UKJ0 227 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 NUP50Q9UKX7 468 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 GPR132Q9UNW8 380 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 SRPK3Q9UPE1 567 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 PRR14LQ5THK1 2151 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 AHCTF1Q8WYP5 2266 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 IGKV1-12A0A0C4DH73 117 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 NPIPB13A6NJU9 1138 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 NPIPB4C9JG80 1138 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 ZFAND5O76080 213 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 IGKV1D-12P01611 117 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 HIST1H1DP16402 221 aaKnown RBP5.28□□□□□ -1.56
CLCN3-201ENST00000347613 B3GALT5-AS1P59052 145 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 B2MP61769 119 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 LPAL2Q16609 132 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 MST1LQ2TV78 715 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 OVCH2Q7RTZ1 564 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 KMT5CQ86Y97 462 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 OR5AP2Q8NGF4 316 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 OR5D14Q8NGL3 314 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 OR6S1Q8NH40 331 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 PTX4Q96A99 478 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 SGK3Q96BR1 496 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 TMEM41AQ96HV5 264 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 GUCD1Q96NT3 240 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 GPHA2Q96T91 129 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 SLC25A21Q9BQT8 299 aaPredicted RBP5.28□□□□□ -1.56
CLCN3-201ENST00000347613 TMEM231Q9H6L2 316 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 SCPEP1Q9HB40 452 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 MYOZ1Q9NP98 299 aaPredicted RBP5.28□□□□□ -1.56
CLCN3-201ENST00000347613 RARRES3Q9UL19 164 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 ANAPC10Q9UM13 185 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 CSAG2Q9Y5P2 127 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 ESPL1Q14674 2120 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 URB1O60287 2271 aaKnown RBP5.28□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF503-AS2A6NEH8 195 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 C9JQL5 133 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 D6RAR5 112 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 IGHG1P01857 330 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 FAM157CP0CG43 387 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF43P17038 809 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 RCC1P18754 421 aaPredicted RBP5.28□□□□□ -1.56
CLCN3-201ENST00000347613 M6PRP20645 277 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 SERPINA2P20848 420 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 CCL1P22362 96 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 RFC3P40938 356 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 TCEAL6Q6IPX3 200 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF600Q6ZNG1 722 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 YRDCQ86U90 279 aaKnown RBP5.28□□□□□ -1.56
CLCN3-201ENST00000347613 PPP1R3BQ86XI6 285 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 MISPQ8IVT2 679 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 OR10H5Q8NGA6 315 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 IFI44Q8TCB0 444 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 TCEAL3Q969E4 200 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 OXGR1Q96P68 337 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 ZNF160Q9HCG1 818 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 FOXD3Q9UJU5 478 aaPredicted RBP5.28□□□□□ -1.56
CLCN3-201ENST00000347613 PRELID1Q9Y255 219 aa5.28□□□□□ -1.56
CLCN3-201ENST00000347613 DNAJC13O75165 2243 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 A0A0B4J2A0 478 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 A0A1W2PNU3 283 aaPredicted RBP5.27□□□□□ -1.57
CLCN3-201ENST00000347613 IGHV3-9P01782 118 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 HCKP08631 526 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 NUP62P37198 522 aaPredicted RBP5.27□□□□□ -1.57
CLCN3-201ENST00000347613 RAB14P61106 215 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 PPIAP62937 165 aaKnown RBP5.27□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF273Q14593 569 aa5.27□□□□□ -1.57
CLCN3-201ENST00000347613 GUCA2BQ16661 112 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms