RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ZFP36P26651 326 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 CD80P33681 288 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 SNRPGP62308 76 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 ZNF154Q13106 437 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 C1QL2Q7Z5L3 287 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 ZNF555Q8NEP9 628 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 OR5P3Q8WZ94 311 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 ITPKCQ96DU7 683 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 LYZL4Q96KX0 146 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 TECTBQ96PL2 329 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 TMPRSS13Q9BYE2 586 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 PLEKHA1Q9HB21 404 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 DNAJB11Q9UBS4 358 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 PIGLQ9Y2B2 252 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 WNK2Q9Y3S1 2297 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 LOC105371242A0A075B767 164 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 A0A1B0GVI7 797 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 A0A1W2PQL4 384 aaPredicted RBP13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 DAPL1A0PJW8 107 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 OR5B21A6NL26 309 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 ADAM20O43506 726 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 MUC1P15941 1255 aaPredicted RBP13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 ZNF12P17014 697 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 ACKR3P25106 362 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 GNG3P63215 75 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 HNRNPA0Q13151 305 aaKnown RBP13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 OCLNQ16625 522 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 SLC25A30Q5SVS4 291 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 ZNF684Q5T5D7 378 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 ZNF826PQ6ZT77 177 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 KCTD20Q7Z5Y7 419 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 ELMOD2Q8IZ81 293 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 C19orf18Q8NEA5 215 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 CCDC54Q8NEL0 328 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 JMJD8Q96S16 334 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 C8orf4Q9NR00 106 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 INSIG2Q9Y5U4 225 aa13.19□□□□□ -0.3
TSPAN4-201ENST00000346501 CDIPTO14735 213 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 APOL3O95236 402 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 NRASP01111 189 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 TTRP02766 147 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 EPHA1P21709 976 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 CFHR2P36980 270 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 RBMXP38159 391 aaKnown RBP13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 SEC61A1P61619 476 aaKnown RBP13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 CEACAM21Q3KPI0 293 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 PLCXD3Q63HM9 321 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 WDR25Q64LD2 544 aaPredicted RBP13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 RBMS3Q6XE24 437 aaKnown RBP13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 MOB3CQ70IA8 216 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 DOK3Q7L591 496 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 SLC36A1Q7Z2H8 476 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 BPIFB2Q8N4F0 458 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 GCSAMQ8N6F7 178 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 OR5A2Q8NGI9 324 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 OR10Z1Q8NGY1 313 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 ZNF671Q8TAW3 534 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 RAB40AQ8WXH6 277 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 RNFT2Q96EX2 444 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 RDH12Q96NR8 316 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 SUCNR1Q9BXA5 334 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 MRM2Q9UI43 246 aaKnown RBP13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 GNG8Q9UK08 70 aa13.18□□□□□ -0.3
TSPAN4-201ENST00000346501 DHRS7CA6NNS2 312 aa13.17□□□□□ -0.3
TSPAN4-201ENST00000346501 ZNF732B4DXR9 585 aa13.17□□□□□ -0.3
TSPAN4-201ENST00000346501 ENSAO43768 121 aaKnown RBP13.17□□□□□ -0.3
TSPAN4-201ENST00000346501 ENTPD6O75354 484 aa13.17□□□□□ -0.3
TSPAN4-201ENST00000346501 SERPINA3P01011 423 aa13.17□□□□□ -0.3
TSPAN4-201ENST00000346501 GYPAP02724 150 aa13.17□□□□□ -0.3
TSPAN4-201ENST00000346501 LIPFP07098 398 aa13.17□□□□□ -0.3
TSPAN4-201ENST00000346501 GPM6AP51674 278 aa13.17□□□□□ -0.3
TSPAN4-201ENST00000346501 CSNK2BP67870 215 aa13.17□□□□□ -0.3
TSPAN4-201ENST00000346501 MFGE8Q08431 387 aaPredicted RBP13.17□□□□□ -0.3
TSPAN4-201ENST00000346501 CLVS2Q5SYC1 327 aa13.17□□□□□ -0.3
TSPAN4-201ENST00000346501 WDR82Q6UXN9 313 aa13.17□□□□□ -0.3
TSPAN4-201ENST00000346501 C12orf43Q96C57 262 aaKnown RBP13.17□□□□□ -0.3
TSPAN4-201ENST00000346501 NUDT16L1Q9BRJ7 211 aaKnown RBP13.17□□□□□ -0.3
TSPAN4-201ENST00000346501 MMP26Q9NRE1 261 aa13.17□□□□□ -0.3
TSPAN4-201ENST00000346501 IGHV2-70DA0A0C4DH43 119 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 LOC100130705A0A1B0GUX0 176 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 NKX6-3A6NJ46 265 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 PRR32B1ATL7 298 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 TRAPPC2LH3BP13 241 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 TMPRSS2O15393 492 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 MAGEB4O15481 346 aaPredicted RBP13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 SYT7O43581 403 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 FADS2O95864 444 aaKnown RBP13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 ECDO95905 644 aaPredicted RBP13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 LHBP01229 141 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 FAHP16930 419 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 ADRA2CP18825 462 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 PSMB10P40306 273 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 ACTA2P62736 377 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 ACTG2P63267 376 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 C11orf91Q3C1V1 193 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 CEP78Q5JTW2 689 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 TEX36Q5VZQ5 186 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 LYPD2Q6UXB3 125 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 ACBD7Q8N6N7 88 aa13.16□□□□□ -0.3
TSPAN4-201ENST00000346501 PNLDC1Q8NA58 520 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms