RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 C11orf87Q6NUJ2 197 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 OR51T1Q8NGJ9 327 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 OR2AE1Q8NHA4 323 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 OR14L1PQ8NHC6 308 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 TERB2Q8NHR7 220 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 LRRC20Q8TCA0 184 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 MAFIPQ8WZ33 124 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 ROBO4Q8WZ75 1007 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 C5orf66Q9H5L9 145 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 SDHAF2Q9NX18 166 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 PADI1Q9ULC6 663 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 TNFSF18Q9UNG2 199 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 PCDHGA1Q9Y5H4 931 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 RNF222A6NCQ9 220 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 ZSCAN5BA6NJL1 495 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 DBX1A6NMT0 343 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 ZNF716A6NP11 495 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 PATE4P0C8F1 98 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 UBBP0CG47 229 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 MGMTP16455 207 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 SERPINA2P20848 420 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 CRYGSP22914 178 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 ACKR3P25106 362 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 NPY4RP50391 375 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 FAHD2BQ6P2I3 314 aaPredicted RBP13.51□□□□□ -0.25
UPF3B-202ENST00000345865 KCTD9Q7L273 389 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 SLC51BQ86UW2 128 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 TMEM230Q96A57 120 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 FAHD2AQ96GK7 314 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 PHB2Q99623 299 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 URM1Q9BTM9 101 aaKnown RBP13.51□□□□□ -0.25
UPF3B-202ENST00000345865 CRLF2Q9HC73 371 aa13.51□□□□□ -0.25
UPF3B-202ENST00000345865 AHCTF1Q8WYP5 2266 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 GPR179Q6PRD1 2367 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 PINLYPA6NC86 204 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 FAM25EA8MYX2 175 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 P04436 131 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 PI3P19957 117 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
UPF3B-202ENST00000345865 CARD18P57730 90 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 CHAF1BQ13112 559 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 ATXN7L3Q14CW9 347 aaPredicted RBP13.5□□□□□ -0.25
UPF3B-202ENST00000345865 PNLIPRP3Q17RR3 467 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 BEX5Q5H9J7 111 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 WIPI1Q5MNZ9 446 aaPredicted RBP13.5□□□□□ -0.25
UPF3B-202ENST00000345865 VAX1Q5SQQ9 334 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 DCAF12Q5T6F0 453 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 JMJD6Q6NYC1 403 aaPredicted RBP13.5□□□□□ -0.25
UPF3B-202ENST00000345865 OR5M9Q8NGP3 310 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 CT55Q8WUE5 264 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 INTS12Q96CB8 462 aaKnown RBP13.5□□□□□ -0.25
UPF3B-202ENST00000345865 MICU1Q9BPX6 476 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 ST6GALNAC5Q9BVH7 336 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 SF3B5Q9BWJ5 86 aaKnown RBP13.5□□□□□ -0.25
UPF3B-202ENST00000345865 GPR132Q9UNW8 380 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 KCNAB3O43448 404 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 SYNGR3O43761 229 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 CXCL13O43927 109 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 DUS4LO95620 317 aaKnown RBP13.5□□□□□ -0.25
UPF3B-202ENST00000345865 SLC25A4P12235 298 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 ACP1P24666 158 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 BLVRBP30043 206 aaPredicted RBP13.5□□□□□ -0.25
UPF3B-202ENST00000345865 ZNF84P51523 738 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 FGL1Q08830 312 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 ARFRP1Q13795 201 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 ZNF774Q6NX45 483 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.5□□□□□ -0.25
UPF3B-202ENST00000345865 ESX1Q8N693 406 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 PNLDC1Q8NA58 520 aaKnown RBP13.5□□□□□ -0.25
UPF3B-202ENST00000345865 RELL2Q8NC24 303 aaPredicted RBP13.5□□□□□ -0.25
UPF3B-202ENST00000345865 OR1S1Q8NH92 325 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 PP6455Q8WZ26 134 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 HAS2Q92819 552 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 ADGRG7Q96K78 797 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 ALKBH3Q96Q83 286 aaPredicted RBP13.5□□□□□ -0.25
UPF3B-202ENST00000345865 PRR13Q9NZ81 148 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 LOXL2Q9Y4K0 774 aa13.5□□□□□ -0.25
UPF3B-202ENST00000345865 SDCBPO00560 298 aaPredicted RBP13.49□□□□□ -0.25
UPF3B-202ENST00000345865 HPNP05981 417 aa13.49□□□□□ -0.25
UPF3B-202ENST00000345865 GP1BAP07359 652 aa13.49□□□□□ -0.25
UPF3B-202ENST00000345865 AGTR1P30556 359 aa13.49□□□□□ -0.25
UPF3B-202ENST00000345865 BAMBIQ13145 260 aa13.49□□□□□ -0.25
UPF3B-202ENST00000345865 CCDC157Q569K6 752 aa13.49□□□□□ -0.25
UPF3B-202ENST00000345865 ACER2Q5QJU3 275 aa13.49□□□□□ -0.25
UPF3B-202ENST00000345865 H3F3CQ6NXT2 135 aa13.49□□□□□ -0.25
UPF3B-202ENST00000345865 SLC16A14Q7RTX9 510 aa13.49□□□□□ -0.25
UPF3B-202ENST00000345865 KCNRGQ8N5I3 272 aa13.49□□□□□ -0.25
UPF3B-202ENST00000345865 OR13G1Q8NGZ3 307 aa13.49□□□□□ -0.25
UPF3B-202ENST00000345865 GJE1A6NN92 205 aa13.48□□□□□ -0.25
UPF3B-202ENST00000345865 CEACAM18A8MTB9 384 aa13.48□□□□□ -0.25
UPF3B-202ENST00000345865 EEF1E1-BLOC1S5C9J1V9 151 aa13.48□□□□□ -0.25
UPF3B-202ENST00000345865 SGCEO43556 437 aa13.48□□□□□ -0.25
UPF3B-202ENST00000345865 B4GALT1P15291 398 aa13.48□□□□□ -0.25
UPF3B-202ENST00000345865 AADACL3Q5VUY0 350 aa13.48□□□□□ -0.25
UPF3B-202ENST00000345865 FGFBP3Q8TAT2 258 aa13.48□□□□□ -0.25
UPF3B-202ENST00000345865 SUN5Q8TC36 379 aa13.48□□□□□ -0.25
UPF3B-202ENST00000345865 ST8SIA2Q92186 375 aa13.48□□□□□ -0.25
UPF3B-202ENST00000345865 PSMF1Q92530 271 aa13.48□□□□□ -0.25
UPF3B-202ENST00000345865 SPTSSAQ969W0 71 aa13.48□□□□□ -0.25
UPF3B-202ENST00000345865 LINC00052Q96N35 136 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms