RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 MRPS14O60783 128 aaKnown RBP10.04□□□□□ -0.8
SNCA-202ENST00000345009 GATBO75879 557 aaKnown RBP10.04□□□□□ -0.8
SNCA-202ENST00000345009 LY6HO94772 140 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 IGLV3-1P01715 115 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 CCL1P22362 96 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 CD200P41217 278 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 WNT4P56705 351 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 CLVS2Q5SYC1 327 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 OR2G6Q5TZ20 316 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 PRSS48Q7RTY5 328 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 TGIF2LYQ8IUE0 185 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 ZDHHC23Q8IYP9 409 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 C1orf87Q8N0U7 546 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 NANOGP1Q8N7R0 232 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 OR11L1Q8NGX0 322 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 ITLN1Q8WWA0 313 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 GTF3AQ92664 365 aaKnown RBP10.04□□□□□ -0.8
SNCA-202ENST00000345009 RAB1CQ92928 201 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 RTL8AQ9BWD3 113 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 FN3KRPQ9HA64 309 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 NEK6Q9HC98 313 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 V9GYS6 101 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 A0A1B0GTI1 187 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 LOC107986453A0A1B0GWG9 222 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 OR4C45A6NMZ5 311 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 ZNF850A8MQ14 1090 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 CLDN25C9JDP6 229 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 MLNRO43193 412 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 PPIHO43447 177 aaKnown RBP10.03□□□□□ -0.8
SNCA-202ENST00000345009 NCR1O76036 304 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 NRASP01111 189 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 CD2P06729 351 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 HEXAP06865 529 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 OCM2P0CE71 109 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 OCMP0CE72 109 aaPredicted RBP10.03□□□□□ -0.8
SNCA-202ENST00000345009 ZNF20P17024 532 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 FLNAP21333 2647 aaKnown RBP10.03□□□□□ -0.8
SNCA-202ENST00000345009 ANOS1P23352 680 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 COL8A2P25067 703 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 ACKR3P25106 362 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 GIFP27352 417 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 KIR3DL2P43630 455 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 GATA4P43694 442 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 NANOS3P60323 173 aaKnown RBP10.03□□□□□ -0.8
SNCA-202ENST00000345009 GABARAPL2P60520 117 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 BDH1Q02338 343 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 MVKQ03426 396 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 PRDX4Q13162 271 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 KRT74Q7RTS7 529 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 RDH10Q8IZV5 341 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 WFDC11Q8NEX6 87 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 OR14K1Q8NGZ2 314 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 C10orf105Q8TEF2 133 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 PP6455Q8WZ26 134 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 RNF170Q96K19 258 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 MEGF10Q96KG7 1140 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 ERVK-18Q9QC07 812 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 SLC7A11Q9UPY5 501 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 CELSR1Q9NYQ6 3014 aa10.03□□□□□ -0.8
SNCA-202ENST00000345009 OR5B21A6NL26 309 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 A6NLC8 198 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 TMEM210A6NLX4 147 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 E9PI62 339 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 H0YL77 283 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 OGG1O15527 345 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 ZFPL1O95159 310 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 GRPP07492 148 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 FAHP16930 419 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 NR4A2P43354 598 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 GPR6P46095 362 aaPredicted RBP10.02□□□□□ -0.81
SNCA-202ENST00000345009 TNK1Q13470 666 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 CDK5R1Q15078 307 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 SPHARQ15513 63 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 MED22Q15528 200 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 CEACAM21Q3KPI0 293 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 PLCXD3Q63HM9 321 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 DNM1P46Q6ZS02 220 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 Q6ZSR3 168 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 KCTD8Q6ZWB6 473 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 MOB3CQ70IA8 216 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 OR5A2Q8NGI9 324 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 OR13C3Q8NGS6 347 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 GPR148Q8TDV2 347 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 TSEN15Q8WW01 171 aaKnown RBP10.02□□□□□ -0.81
SNCA-202ENST00000345009 THRSPQ92748 146 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 SMIM19Q96E16 107 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 PDCD1LG2Q9BQ51 273 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 REG4Q9BYZ8 158 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 GCM1Q9NP62 436 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 TMEM106BQ9NUM4 274 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 UBAP1Q9NZ09 502 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 DHDHQ9UQ10 334 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 ZNF281Q9Y2X9 895 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 LRRC42Q9Y546 428 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 ACANP16112 2415 aa10.02□□□□□ -0.81
SNCA-202ENST00000345009 ANKRD61A6NGH8 418 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 LYNX1G3V0Z9 82 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 LYNX1P0DP58 116 aa10.01□□□□□ -0.81
SNCA-202ENST00000345009 USF1P22415 310 aaPredicted RBP10.01□□□□□ -0.81
SNCA-202ENST00000345009 GTF2A1P52655 376 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms