RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 HLA-BQ31612 363 aa16.8■□□□□ 0.28
LYSMD4-202ENST00000344791 TMEM88Q6PEY1 159 aa16.8■□□□□ 0.28
LYSMD4-202ENST00000344791 DRAM2Q6UX65 266 aa16.8■□□□□ 0.28
LYSMD4-202ENST00000344791 OR5AP2Q8NGF4 316 aa16.8■□□□□ 0.28
LYSMD4-202ENST00000344791 OR10C1Q96KK4 312 aa16.8■□□□□ 0.28
LYSMD4-202ENST00000344791 IGKV1D-8A0A087WSZ0 117 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 F12P00748 615 aaPredicted RBP16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 SLC25A53Q5H9E4 307 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 GTPBP8Q8N3Z3 284 aaPredicted RBP16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 TMEM156Q8N614 296 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 CHRDQ9H2X0 955 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 GPR173Q9NS66 373 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 SLC39A1Q9NY26 324 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 GPR132Q9UNW8 380 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 ARPC4-TTLL3A0A0A6YYG9 625 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 A0A1B0GW55 424 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 GPR31O00270 319 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 TP53I11O14683 189 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 HPNP05981 417 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 GP1BAP07359 652 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 DUX4L2P0CJ85 424 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 DUX4L3P0CJ86 424 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 DUX4L4P0CJ87 422 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 DUX4L5P0CJ88 424 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 DUX4L6P0CJ89 424 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 DUX4L7P0CJ90 424 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 MSR1P21757 451 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 SRSF3P84103 164 aaKnown RBP16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 TFAP2EQ6VUC0 442 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 C20orf196Q8IYI0 205 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 OR52H1Q8NGJ2 320 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 RNF126Q9BV68 326 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 DUX4Q9UBX2 424 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 ADAMTS9Q9P2N4 1935 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 CCDC85CA6NKD9 419 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 ETV2O00321 342 aaPredicted RBP16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 MFNGO00587 321 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 SCGNO76038 276 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 STARD6P59095 220 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 SUPT4H1P63272 117 aaKnown RBP16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 SLC35A1P78382 337 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 SNAI3Q3KNW1 292 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 LDAHQ9H6V9 325 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 FANCFQ9NPI8 374 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 DKKL1Q9UK85 242 aa16.79■□□□□ 0.28
LYSMD4-202ENST00000344791 AHCTF1Q8WYP5 2266 aa16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 PATE3B3GLJ2 98 aa16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 SPRY1O43609 319 aaPredicted RBP16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 GSTP1P09211 210 aaKnown RBP16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 AIMP2Q13155 320 aaKnown RBP16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 CCDC157Q569K6 752 aa16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 SHDQ96IW2 340 aa16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 CDC6Q99741 560 aa16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 RTBDNQ9BSG5 229 aaPredicted RBP16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 FLVCR1Q9Y5Y0 555 aa16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 FAM230AA0A1W2PPH8 454 aa16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 FAM221AA4D161 298 aa16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 RAB32Q13637 225 aa16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 PCOLCEQ15113 449 aa16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 PDCD1Q15116 288 aa16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 CHRFAM7AQ494W8 412 aa16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 ZNF468Q5VIY5 522 aaPredicted RBP16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 DYRK2Q92630 601 aa16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 HDGFL3Q9Y3E1 203 aa16.78■□□□□ 0.28
LYSMD4-202ENST00000344791 TOX3O15405 576 aaPredicted RBP16.77■□□□□ 0.28
LYSMD4-202ENST00000344791 TMEM225BP0DP42 221 aa16.77■□□□□ 0.28
LYSMD4-202ENST00000344791 RRADP55042 308 aa16.77■□□□□ 0.28
LYSMD4-202ENST00000344791 GRB2P62993 217 aaKnown RBP16.77■□□□□ 0.28
LYSMD4-202ENST00000344791 AADACL3Q5VUY0 350 aa16.77■□□□□ 0.28
LYSMD4-202ENST00000344791 ZNF585AQ6P3V2 769 aa16.77■□□□□ 0.28
LYSMD4-202ENST00000344791 SAP25Q8TEE9 199 aa16.77■□□□□ 0.28
LYSMD4-202ENST00000344791 PIK3IP1Q96FE7 263 aa16.77■□□□□ 0.28
LYSMD4-202ENST00000344791 ULBP2Q9BZM5 246 aa16.77■□□□□ 0.28
LYSMD4-202ENST00000344791 DBX1A6NMT0 343 aa16.77■□□□□ 0.27
LYSMD4-202ENST00000344791 M0R135 149 aa16.77■□□□□ 0.27
LYSMD4-202ENST00000344791 TSPAN9O75954 239 aa16.77■□□□□ 0.27
LYSMD4-202ENST00000344791 SRSF4Q08170 494 aaKnown RBP16.77■□□□□ 0.27
LYSMD4-202ENST00000344791 ENDOGQ14249 297 aaKnown RBP16.77■□□□□ 0.27
LYSMD4-202ENST00000344791 ZNF169Q14929 603 aaPredicted RBP16.77■□□□□ 0.27
LYSMD4-202ENST00000344791 TMEM17Q86X19 198 aa16.77■□□□□ 0.27
LYSMD4-202ENST00000344791 RNF138Q8WVD3 245 aa16.77■□□□□ 0.27
LYSMD4-202ENST00000344791 ZNF799Q96GE5 643 aa16.77■□□□□ 0.27
LYSMD4-202ENST00000344791 DUSP23Q9BVJ7 150 aa16.77■□□□□ 0.27
LYSMD4-202ENST00000344791 NELFAQ9H3P2 528 aa16.77■□□□□ 0.27
LYSMD4-202ENST00000344791 PLEKHJ1Q9NW61 149 aa16.77■□□□□ 0.27
LYSMD4-202ENST00000344791 PRRC2CQ9Y520 2896 aaKnown RBP16.76■□□□□ 0.27
LYSMD4-202ENST00000344791 OPRM1P35372 400 aa16.76■□□□□ 0.27
LYSMD4-202ENST00000344791 HIST3H3Q16695 136 aa16.76■□□□□ 0.27
LYSMD4-202ENST00000344791 CDCP2Q5VXM1 449 aa16.76■□□□□ 0.27
LYSMD4-202ENST00000344791 YRDCQ86U90 279 aaKnown RBP16.76■□□□□ 0.27
LYSMD4-202ENST00000344791 GJC3Q8NFK1 279 aa16.76■□□□□ 0.27
LYSMD4-202ENST00000344791 IFI44Q8TCB0 444 aa16.76■□□□□ 0.27
LYSMD4-202ENST00000344791 CPNE2Q96FN4 548 aaPredicted RBP16.76■□□□□ 0.27
LYSMD4-202ENST00000344791 PECRQ9BY49 303 aa16.76■□□□□ 0.27
LYSMD4-202ENST00000344791 MCTS1Q9ULC4 181 aaKnown RBP16.76■□□□□ 0.27
LYSMD4-202ENST00000344791 SIT1Q9Y3P8 196 aa16.76■□□□□ 0.27
LYSMD4-202ENST00000344791 SFT2D2O95562 160 aa16.76■□□□□ 0.27
LYSMD4-202ENST00000344791 HLA-GP17693 338 aa16.76■□□□□ 0.27
LYSMD4-202ENST00000344791 EIF1P41567 113 aaKnown RBP16.76■□□□□ 0.27
LYSMD4-202ENST00000344791 TAS2R31P59538 309 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms