RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 A0A0U1RQV5 110 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 DBX1A6NMT0 343 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 B8ZZF3 427 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 CBR3O75828 277 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 B3GALT5-AS1P59052 145 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 CSNK2A1P68400 391 aaPredicted RBP18.75■□□□□ 0.59
CCDC38-201ENST00000344280 TRA2AQ13595 282 aaKnown RBP eCLIP18.75■□□□□ 0.59
CCDC38-201ENST00000344280 ARFRP1Q13795 201 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 VAX1Q5SQQ9 334 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 PDZD9Q8IXQ8 264 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 FAM89BQ8N5H3 189 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 GALNT11Q8NCW6 608 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 OCSTAMPQ9BR26 566 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 NAA11Q9BSU3 229 aaPredicted RBP18.75■□□□□ 0.59
CCDC38-201ENST00000344280 URM1Q9BTM9 101 aaKnown RBP18.75■□□□□ 0.59
CCDC38-201ENST00000344280 C13orf42A0A1B0GVH6 325 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 FOXI3A8MTJ6 420 aaPredicted RBP18.75■□□□□ 0.59
CCDC38-201ENST00000344280 A8MXK9 166 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 SDCBPO00560 298 aaPredicted RBP18.75■□□□□ 0.59
CCDC38-201ENST00000344280 HPP00738 406 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 NAT2P11245 290 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 FCGR2AP12318 317 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 ZP3P21754 424 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 DLSTP36957 453 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 RIPPLY1Q0D2K3 151 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 PNLDC1Q8NA58 520 aaKnown RBP18.75■□□□□ 0.59
CCDC38-201ENST00000344280 PFDN2Q9UHV9 154 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 GPR160Q9UJ42 338 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 GPR132Q9UNW8 380 aa18.75■□□□□ 0.59
CCDC38-201ENST00000344280 COLQQ9Y215 455 aaPredicted RBP18.75■□□□□ 0.59
CCDC38-201ENST00000344280 PMS2P1A4D2B8 440 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 RFPL3SP0C7P2 107 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 SERPINF1P36955 418 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 ZNF345Q14585 488 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 PEAR1Q5VY43 1037 aaPredicted RBP18.74■□□□□ 0.59
CCDC38-201ENST00000344280 OR2AE1Q8NHA4 323 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 ROBO4Q8WZ75 1007 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 PIGQQ9BRB3 760 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 CHST5Q9GZS9 411 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 MBD2Q9UBB5 411 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 HTR3BO95264 441 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 UBBP0CG47 229 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 BLVRBP30043 206 aaPredicted RBP18.74■□□□□ 0.59
CCDC38-201ENST00000344280 THBS4P35443 961 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 HGFACQ04756 655 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 PNLIPRP3Q17RR3 467 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 C20orf196Q8IYI0 205 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 IER2Q9BTL4 223 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 SPEF1Q9Y4P9 236 aa18.74■□□□□ 0.59
CCDC38-201ENST00000344280 C5orf51A6NDU8 294 aa18.73■□□□□ 0.59
CCDC38-201ENST00000344280 OR2F2O95006 317 aa18.73■□□□□ 0.59
CCDC38-201ENST00000344280 HPNP05981 417 aa18.73■□□□□ 0.59
CCDC38-201ENST00000344280 FGF2P09038 288 aa18.73■□□□□ 0.59
CCDC38-201ENST00000344280 AMY2BP19961 511 aa18.73■□□□□ 0.59
CCDC38-201ENST00000344280 UBA52P62987 128 aaKnown RBP18.73■□□□□ 0.59
CCDC38-201ENST00000344280 OR2F1Q13607 317 aa18.73■□□□□ 0.59
CCDC38-201ENST00000344280 LPAL2Q16609 132 aa18.73■□□□□ 0.59
CCDC38-201ENST00000344280 ARMC10Q8N2F6 343 aa18.73■□□□□ 0.59
CCDC38-201ENST00000344280 STPG2Q8N412 459 aa18.73■□□□□ 0.59
CCDC38-201ENST00000344280 OR13G1Q8NGZ3 307 aa18.73■□□□□ 0.59
CCDC38-201ENST00000344280 SGK3Q96BR1 496 aa18.73■□□□□ 0.59
CCDC38-201ENST00000344280 ARPC5LQ9BPX5 153 aa18.73■□□□□ 0.59
CCDC38-201ENST00000344280 ELL3Q9HB65 397 aaPredicted RBP18.73■□□□□ 0.59
CCDC38-201ENST00000344280 KANTRA0A1W2PQU2 76 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 LAMTOR5O43504 91 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 BCL2L11O43521 198 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 PATE4P0C8F1 98 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 ACKR3P25106 362 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 OTX2P32243 289 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 NUP62P37198 522 aaPredicted RBP18.72■□□□□ 0.59
CCDC38-201ENST00000344280 STARP49675 285 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 SUCLG1P53597 346 aaKnown RBP18.72■□□□□ 0.59
CCDC38-201ENST00000344280 SLC9A3R2Q15599 337 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 TMEM128Q5BJH2 165 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 AADACL3Q5VUY0 350 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 ARRDC1Q8N5I2 433 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 BVESQ8NE79 360 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 OR5H2Q8NGV7 314 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 ZNF471Q9BX82 626 aaPredicted RBP18.72■□□□□ 0.59
CCDC38-201ENST00000344280 CCDC187A0A096LP49 1063 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 MPTX1A8MV57 137 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 F10P00742 488 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 ALDH3B1P43353 468 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 DUSP3P51452 185 aaPredicted RBP18.72■□□□□ 0.59
CCDC38-201ENST00000344280 SNU13P55769 128 aaKnown RBP18.72■□□□□ 0.59
CCDC38-201ENST00000344280 SUPT4H1P63272 117 aaKnown RBP18.72■□□□□ 0.59
CCDC38-201ENST00000344280 FAM27BQ5VT28 67 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 ACOT7LQ6ZUV0 252 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 PPP1R32Q7Z5V6 425 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 RTBDNQ9BSG5 229 aaPredicted RBP18.72■□□□□ 0.59
CCDC38-201ENST00000344280 PECRQ9BY49 303 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 MS4A7Q9GZW8 240 aaPredicted RBP18.72■□□□□ 0.59
CCDC38-201ENST00000344280 CRLF2Q9HC73 371 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 PCDHGA1Q9Y5H4 931 aa18.72■□□□□ 0.59
CCDC38-201ENST00000344280 ADAP1O75689 374 aa18.71■□□□□ 0.59
CCDC38-201ENST00000344280 CER1O95813 267 aa18.71■□□□□ 0.59
CCDC38-201ENST00000344280 ZNF774Q6NX45 483 aa18.71■□□□□ 0.59
CCDC38-201ENST00000344280 CLEC18BQ6UXF7 455 aa18.71■□□□□ 0.59
CCDC38-201ENST00000344280 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.71■□□□□ 0.59
CCDC38-201ENST00000344280 GGNQ86UU5 652 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms