RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 COX5AP20674 150 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 THBS4P35443 961 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 OR4F5Q8NH21 305 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 OR4F4Q96R69 305 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 CREBZFQ9NS37 354 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF586Q9NXT0 402 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 DMRT1Q9Y5R6 373 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 XKRY2A2RUG3 117 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 OR5H15A6NDH6 313 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 OR5H1A6NKK0 313 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 PPM1DO15297 605 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 ARG1P05089 322 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 ICAM2P13598 275 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 NCMAPQ5T1S8 102 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 NSUN5P2Q63ZY6 315 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF574Q6ZN55 896 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-203ENST00000343508 SLC37A2Q8TED4 501 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 B3GAT1Q9P2W7 334 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 NLRC5Q86WI3 1866 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 SELENOVP59797 346 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.29□□□□□ -1.72
CSMD3-203ENST00000343508 GCNT2Q8N0V5 402 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 C10orf35Q96D05 121 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 MRGPRX4Q96LA9 322 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 PITPNC1Q9UKF7 332 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 TRPM7Q96QT4 1865 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 TPPP2P59282 170 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 SHHQ15465 462 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 KISS1Q15726 138 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 UBE2V2Q15819 145 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF528Q3MIS6 628 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 PUSL1Q8N0Z8 303 aaKnown RBP4.29□□□□□ -1.72
CSMD3-203ENST00000343508 TMEM68Q96MH6 324 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 AQP10Q96PS8 301 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 PRSS27Q9BQR3 290 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 EMC6Q9BV81 110 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-203ENST00000343508 ITGBL1O95965 494 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-203ENST00000343508 UBE2NP61088 152 aaKnown RBP4.29□□□□□ -1.72
CSMD3-203ENST00000343508 GUCA2BQ16661 112 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 FAM74A3Q4VXF1 159 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 OR10P1Q8NGE3 313 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 MR1Q95460 341 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 GPR87Q9BY21 358 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 GCM1Q9NP62 436 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 LYRM2Q9NU23 88 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-203ENST00000343508 OR14J1Q9UGF5 321 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 CA14Q9ULX7 337 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 A0A1W2PPV9 198 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 AKR7A3O95154 331 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 MPGP29372 298 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 S100A7AQ86SG5 101 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 NECAP1Q8NC96 275 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 RCC2Q9P258 522 aaKnown RBP4.29□□□□□ -1.72
CSMD3-203ENST00000343508 ST3GAL6Q9Y274 331 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 XRCC2O43543 280 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 NXPH3O95157 252 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 GPANK1O95872 356 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 CEACAM5P06731 702 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 OR5AC1P0C628 307 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 CCKARP32238 428 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 FAM3BP58499 235 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF66Q6ZN08 573 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 GVQW1Q8N7I0 195 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 DMBX1Q8NFW5 382 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 LIPHQ8WWY8 451 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 KTI12Q96EK9 354 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-203ENST00000343508 ARHGAP5-AS1Q96IT6 56 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 ACTR3CQ9C0K3 210 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-203ENST00000343508 WWTR1Q9GZV5 400 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 FGF22Q9HCT0 170 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 CES1P1Q9UKY3 287 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 TRAPPC2LQ9UL33 140 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 RCL1Q9Y2P8 373 aaKnown RBP4.29□□□□□ -1.72
CSMD3-203ENST00000343508 NEUROG3Q9Y4Z2 214 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 HCFC2Q9Y5Z7 792 aa4.29□□□□□ -1.72
CSMD3-203ENST00000343508 DEDDO75618 318 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 IRF2P14316 349 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 RAB30Q15771 203 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF611Q8N823 705 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 OR5C1Q8NGR4 320 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 SPSB1Q96BD6 273 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 CHRDL1Q9BU40 450 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 FNDC1Q4ZHG4 1894 aaPredicted RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 VSTM5A8MXK1 200 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 ENPP1P22413 925 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 DCDP81605 110 aaKnown RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 SHISA6Q6ZSJ9 500 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 LDLRAD3Q86YD5 345 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 PPP1R35Q8TAP8 253 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 ASB16Q96NS5 453 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 LMAN1LQ9HAT1 526 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 SLC35D1Q9NTN3 355 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 MYOTQ9UBF9 498 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 FBXL17Q9UF56 701 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 LHX6Q9UPM6 363 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 TRAV8-7A0A075B6U6 113 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 DUSP3P51452 185 aaPredicted RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 PPP1CBP62140 327 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF383Q8NA42 475 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms