RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 FAM71F1Q96KD3 344 aaPredicted RBP12.86□□□□□ -0.35
VAPA-201ENST00000340541 RDH12Q96NR8 316 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 TMPRSS13Q9BYE2 586 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 METTL17Q9H7H0 456 aaPredicted RBP12.86□□□□□ -0.35
VAPA-201ENST00000340541 SMPD3Q9NY59 655 aaPredicted RBP12.86□□□□□ -0.35
VAPA-201ENST00000340541 SLC22A13Q9Y226 551 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 EXOGQ9Y2C4 368 aaKnown RBP12.86□□□□□ -0.35
VAPA-201ENST00000340541 SNX5Q9Y5X3 404 aa12.86□□□□□ -0.35
VAPA-201ENST00000340541 PPIAL4CA0A0B4J2A2 164 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 ZNF816-ZNF321PA0A0X1KG74 233 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 A6NLC8 198 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 TRAPPC2LH3BP13 241 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 LGALS8O00214 317 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 TNFRSF13BO14836 293 aaPredicted RBP12.85□□□□□ -0.35
VAPA-201ENST00000340541 FOXH1O75593 365 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 RPP14O95059 124 aaKnown RBP12.85□□□□□ -0.35
VAPA-201ENST00000340541 ATP6V1B1P15313 513 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 RPS2P15880 293 aaKnown RBP12.85□□□□□ -0.35
VAPA-201ENST00000340541 EGR1P18146 543 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 CPT2P23786 658 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 PEX2P28328 305 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 CD80P33681 288 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 MAP2K3P46734 347 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 IL5RAQ01344 420 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 ZNF91Q05481 1191 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 GABPB1Q06547 395 aaPredicted RBP12.85□□□□□ -0.35
VAPA-201ENST00000340541 LRRC36Q1X8D7 754 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 FAM76BQ5HYJ3 339 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 FAHD2BQ6P2I3 314 aaPredicted RBP12.85□□□□□ -0.35
VAPA-201ENST00000340541 LYPD2Q6UXB3 125 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 WDR82Q6UXN9 313 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 USP43Q70EL4 1123 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 CATSPERDQ86XM0 798 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 PIGCQ92535 297 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 LGALS12Q96DT0 336 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 FAHD2AQ96GK7 314 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 MICU1Q9BPX6 476 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 OCEL1Q9H607 264 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 RNPEPL1Q9HAU8 725 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 MMP26Q9NRE1 261 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 GTF2A1LQ9UNN4 478 aa12.85□□□□□ -0.35
VAPA-201ENST00000340541 A0A0G2JMP0 313 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 A0A0X1KG70 313 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 ANXA2P2A6NMY6 339 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.84□□□□□ -0.35
VAPA-201ENST00000340541 MPZL2O60487 215 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 DHRS3O75911 302 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 DBTP11182 482 aaKnown RBP12.84□□□□□ -0.35
VAPA-201ENST00000340541 FAHP16930 419 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 CCL1P22362 96 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 CFHR2P36980 270 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 PSMB10P40306 273 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 PAX2Q02962 417 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 CDONQ4KMG0 1287 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 TP53I3Q53FA7 332 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 ZBTB37Q5TC79 503 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 SFRP4Q6FHJ7 346 aaPredicted RBP12.84□□□□□ -0.35
VAPA-201ENST00000340541 C12orf54Q6X4T0 127 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 DCDC5Q6ZRR9 648 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 COMMD2Q86X83 199 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 ZDHHC23Q8IYP9 409 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 BOLLQ8N9W6 283 aaKnown RBP12.84□□□□□ -0.35
VAPA-201ENST00000340541 DEFB108BQ8NET1 73 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 SEMA6DQ8NFY4 1073 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 OR4M2Q8NGB6 313 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 OR14K1Q8NGZ2 314 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 ZNF418Q8TF45 676 aaPredicted RBP12.84□□□□□ -0.35
VAPA-201ENST00000340541 NEIL1Q96FI4 390 aaPredicted RBP12.84□□□□□ -0.35
VAPA-201ENST00000340541 RTL8AQ9BWD3 113 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 ABCB9Q9NP78 766 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 ACOXLQ9NUZ1 547 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 MIOXQ9UGB7 285 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 OPN4Q9UHM6 478 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 LRCH1Q9Y2L9 728 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 V9GYS6 101 aa12.84□□□□□ -0.35
VAPA-201ENST00000340541 hCG_1807616A0A1W2PRN6 198 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 OOEPA6NGQ2 149 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 TMEM210A6NLX4 147 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 C3orf80F5H4A9 247 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 J3QLI3 93 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 P2RY10O00398 339 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 CDIPTO14735 213 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 CASQ2O14958 399 aaPredicted RBP12.83□□□□□ -0.36
VAPA-201ENST00000340541 WBP4O75554 376 aaKnown RBP12.83□□□□□ -0.36
VAPA-201ENST00000340541 GATA3P23771 443 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 ACTC1P68032 377 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 ACTA1P68133 377 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 RIPPLY1Q0D2K3 151 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 DMRTC1Q5HYR2 192 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 WDR38Q5JTN6 314 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 DCAF12L2Q5VW00 463 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 TEX36Q5VZQ5 186 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 TMEM42Q69YG0 159 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 ZNF841Q6ZN19 808 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 FAM90A1Q86YD7 464 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 PRSS35Q8N3Z0 413 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 PACRGLQ8N7B6 248 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 LRRC29Q8WV35 223 aa12.83□□□□□ -0.36
VAPA-201ENST00000340541 DACT3Q96B18 629 aaPredicted RBP12.83□□□□□ -0.36
VAPA-201ENST00000340541 RNF170Q96K19 258 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms