RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 PAX5Q02548 391 aa6.19□□□□□ -1.42
NUP43-201ENST00000340413 HGFACQ04756 655 aa6.19□□□□□ -1.42
NUP43-201ENST00000340413 FOXF2Q12947 444 aa6.19□□□□□ -1.42
NUP43-201ENST00000340413 SHEQ5VZ18 495 aa6.19□□□□□ -1.42
NUP43-201ENST00000340413 OLFML2AQ68BL7 652 aa6.19□□□□□ -1.42
NUP43-201ENST00000340413 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.19□□□□□ -1.42
NUP43-201ENST00000340413 ZNF573Q86YE8 665 aa6.19□□□□□ -1.42
NUP43-201ENST00000340413 LAX1Q8IWV1 398 aa6.19□□□□□ -1.42
NUP43-201ENST00000340413 OR56B1Q8NGI3 324 aa6.19□□□□□ -1.42
NUP43-201ENST00000340413 LILRB4Q8NHJ6 448 aa6.19□□□□□ -1.42
NUP43-201ENST00000340413 LGALS14Q8TCE9 139 aa6.19□□□□□ -1.42
NUP43-201ENST00000340413 RTL8AQ9BWD3 113 aa6.19□□□□□ -1.42
NUP43-201ENST00000340413 TTTY10Q9BZA0 68 aa6.19□□□□□ -1.42
NUP43-201ENST00000340413 METTL9Q9H1A3 318 aa6.19□□□□□ -1.42
NUP43-201ENST00000340413 C14orf119Q9NWQ9 140 aa6.19□□□□□ -1.42
NUP43-201ENST00000340413 GPR160Q9UJ42 338 aa6.19□□□□□ -1.42
NUP43-201ENST00000340413 NOTCH2Q04721 2471 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 MED19A0JLT2 244 aaPredicted RBP6.18□□□□□ -1.42
NUP43-201ENST00000340413 LRP5LA4QPB2 252 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 CTDSP2O14595 271 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 HPGDSO60760 199 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 NAT1P18440 290 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 CD200P41217 278 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 WNT5AP41221 380 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 ZNF79Q15937 498 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 ZNF718Q3SXZ3 478 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 HIKESHIQ53FT3 197 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 MZT2BQ6NZ67 158 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 C16orf87Q6PH81 154 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 FAM131AQ6UXB0 335 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 Q6ZS49 121 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 LYSMD2Q8IV50 215 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 NAXEQ8NCW5 288 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 MARS2Q96GW9 593 aaKnown RBP6.18□□□□□ -1.42
NUP43-201ENST00000340413 C1orf147Q96MC9 270 aaPredicted RBP6.18□□□□□ -1.42
NUP43-201ENST00000340413 NCOR1P1Q9H4R4 102 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 NPAP1Q9NZP6 1156 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 EXTL2Q9UBQ6 330 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 IGHV2OR16-5A0A0B4J2B6 119 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 IGHV1-18A0A0C4DH31 117 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 TMEM272A0A1B0GTI8 110 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 C5orf49A4QMS7 147 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 CTAG2O75638 210 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 IGHV3-13P01766 116 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 CD55P08174 381 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 SOX2P48431 317 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 OR10A3P58181 314 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 GALK2Q01415 458 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 NAAAQ02083 359 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 MXD1Q05195 221 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 TNK1Q13470 666 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 GK2Q14410 553 aaPredicted RBP6.18□□□□□ -1.42
NUP43-201ENST00000340413 MPV17LQ2QL34 196 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 C2orf76Q3KRA6 126 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 SAMD12Q8N8I0 201 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 OR51T1Q8NGJ9 327 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 OR5P3Q8WZ94 311 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 SDHCQ99643 169 aaPredicted RBP6.18□□□□□ -1.42
NUP43-201ENST00000340413 MICU1Q9BPX6 476 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 CHST6Q9GZX3 395 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 OPN3Q9H1Y3 402 aaPredicted RBP6.18□□□□□ -1.42
NUP43-201ENST00000340413 GTF2A1LQ9UNN4 478 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 MRPS28Q9Y2Q9 187 aaKnown RBP6.18□□□□□ -1.42
NUP43-201ENST00000340413 PTGFRP43088 359 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 ACTBP60709 375 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 RPS27AP62979 156 aaKnown RBP6.18□□□□□ -1.42
NUP43-201ENST00000340413 ACTG1P63261 375 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 ZNF92Q03936 586 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 OXA1LQ15070 435 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 KISS1Q15726 138 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 FAM27D1Q5T7N8 215 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 ADAM5Q6NVV9 412 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 PLXDC2Q6UX71 529 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 Q6ZNX1 250 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 SPATC1Q76KD6 591 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 RELL2Q8NC24 303 aaPredicted RBP6.18□□□□□ -1.42
NUP43-201ENST00000340413 HIST1H2AAQ96QV6 131 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 COMMD3Q9UBI1 195 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 POLDIP2Q9Y2S7 368 aa6.18□□□□□ -1.42
NUP43-201ENST00000340413 CREBBPQ92793 2442 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 IGKV1-9A0A0C4DH69 117 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 ZNF503-AS2A6NEH8 195 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 CD300LBA8K4G0 201 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 FAM25AB3EWG3 89 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 FAM25CB3EWG5 89 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 FAM25GB3EWG6 89 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 EIF4EP06730 217 aaKnown RBP6.17□□□□□ -1.42
NUP43-201ENST00000340413 CSF1P09603 554 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 POU3F4P49335 361 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 GNG3P63215 75 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 INSL4Q14641 139 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 PCSK4Q6UW60 755 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 TMEM108Q6UXF1 575 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 ACBD4Q8NC06 268 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 OR8G5Q8NG78 346 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 OR4M1Q8NGD0 313 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 SYNPRQ8TBG9 265 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 AQP3Q92482 292 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 BORCS8Q96FH0 119 aa6.17□□□□□ -1.42
NUP43-201ENST00000340413 SPACA1Q9HBV2 294 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms