RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 DHRS7CA6NNS2 312 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 SOCS1O15524 211 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 LPLP06858 475 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 IGHV1-2P23083 117 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 BTG1P62324 171 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 CD83Q01151 205 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 PLP2Q04941 152 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 LINC00303Q3SY05 128 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 ACSF3Q4G176 576 aaPredicted RBP19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 OLFML2AQ68BL7 652 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 RAB12Q6IQ22 244 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 TMEM53Q6P2H8 277 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 BTN2A1Q7KYR7 527 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 FGD2Q7Z6J4 655 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 POM121L2Q96KW2 1035 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 C20orf85Q9H1P6 137 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 RGCCQ9H4X1 137 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 GLRX2Q9NS18 164 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 COPZ2Q9P299 210 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 FBLN5Q9UBX5 448 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 ATPIF1Q9UII2 106 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 PIEZO2Q9H5I5 2752 aa19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 IGKV1-27A0A075B6S5 117 aa19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 XRCC2O43543 280 aa19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 ALX3O95076 343 aa19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 DHFRP00374 187 aa19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 NRASP01111 189 aa19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 CSF1P09603 554 aa19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 H2AFB2P0C5Z0 115 aa19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 PSMB1P20618 241 aaKnown RBP19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 SERPINA2P20848 420 aa19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 KIR2DL2P43627 348 aaPredicted RBP19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 GK2Q14410 553 aaPredicted RBP19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 MDP1Q86V88 176 aa19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 BEST4Q8NFU0 473 aa19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 OR10R2Q8NGX6 335 aa19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 NUDCD2Q8WVJ2 157 aa19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 AQP3Q92482 292 aa19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 PIGCQ92535 297 aa19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 AKAP1Q92667 903 aaKnown RBP eCLIP19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 TP63Q9H3D4 680 aaPredicted RBP19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 RANGRFQ9HD47 186 aaPredicted RBP19.42■□□□□ 0.7
PDLIM2-203ENST00000339162 NAP1L6A6NFF2 107 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 OR8B8Q15620 311 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 OR2W3Q7Z3T1 314 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 FYTTD1Q96QD9 318 aaKnown RBP19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 DKK4Q9UBT3 224 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 ZNF391Q9UJN7 358 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 ZNF221Q9UK13 617 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 STARD10Q9Y365 291 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 SPRY1O43609 319 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 ANGPTL7O43827 346 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 NAT2P11245 290 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 GUSBP1Q15486 140 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 CLVS2Q5SYC1 327 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 FJX1Q86VR8 437 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 OR56B4Q8NH76 319 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 SPSB4Q96A44 273 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 ABHD17AQ96GS6 310 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 TAS2R8Q9NYW2 309 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 WASF3Q9UPY6 502 aa19.41■□□□□ 0.7
PDLIM2-203ENST00000339162 TMEM225BP0DP42 221 aa19.4■□□□□ 0.7
PDLIM2-203ENST00000339162 COX5BP10606 129 aa19.4■□□□□ 0.7
PDLIM2-203ENST00000339162 PLAC9Q5JTB6 97 aa19.4■□□□□ 0.7
PDLIM2-203ENST00000339162 S100A13Q99584 98 aa19.4■□□□□ 0.7
PDLIM2-203ENST00000339162 GTF3C1Q12789 2109 aa19.4■□□□□ 0.7
PDLIM2-203ENST00000339162 MOB3CQ70IA8 216 aa19.4■□□□□ 0.7
PDLIM2-203ENST00000339162 MYPOPQ86VE0 399 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-203ENST00000339162 GVQW1Q8N7I0 195 aa19.4■□□□□ 0.7
PDLIM2-203ENST00000339162 OR4S1Q8NGB4 309 aa19.4■□□□□ 0.7
PDLIM2-203ENST00000339162 WNT2BQ93097 391 aa19.4■□□□□ 0.7
PDLIM2-203ENST00000339162 DACT3Q96B18 629 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-203ENST00000339162 POFUT1Q9H488 388 aa19.4■□□□□ 0.7
PDLIM2-203ENST00000339162 TMEM165Q9HC07 324 aa19.4■□□□□ 0.7
PDLIM2-203ENST00000339162 PTTG3PQ9NZH4 202 aa19.4■□□□□ 0.7
PDLIM2-203ENST00000339162 CRIM1Q9NZV1 1036 aa19.4■□□□□ 0.7
PDLIM2-203ENST00000339162 MKRN2OSH3BPM6 223 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 ARPC1BO15143 372 aaKnown RBP19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 MGMTP16455 207 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 KCNJ8Q15842 424 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 TMEM42Q69YG0 159 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 ZNF782Q6ZMW2 699 aaPredicted RBP19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 GABRG1Q8N1C3 465 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 OR56B2PQ8NGI1 322 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 GIMAP1Q8WWP7 306 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 SPSB1Q96BD6 273 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 SCPEP1Q9HB40 452 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 M0QYG6 137 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 SULT1C2O00338 296 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 CELA3BP08861 270 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 UBBP0CG47 229 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 AKAIN1P0CW23 69 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 APLNRP35414 380 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 WNT5AP41221 380 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 TMEM50BP56557 158 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 ACTBP60709 375 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 ACTG1P63261 375 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 CNN3Q15417 329 aaKnown RBP19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 PLCXD3Q63HM9 321 aa19.39■□□□□ 0.69
PDLIM2-203ENST00000339162 STEAP1BQ6NZ63 245 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms