RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 PDCD1LG2Q9BQ51 273 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 NEK6Q9HC98 313 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 ISYNA1Q9NPH2 558 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 ZNF275Q9NSD4 429 aaPredicted RBP10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 SLC7A11Q9UPY5 501 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 DHDHQ9UQ10 334 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 PPP1R3CQ9UQK1 317 aa10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 SIRT4Q9Y6E7 314 aaPredicted RBP10.1□□□□□ -0.79
SPTLC1-202ENST00000337841 LRRC30A6NM36 301 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 LYNX1G3V0Z9 82 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 PLPP2O43688 288 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 GATBO75879 557 aaKnown RBP10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 NCR1O76036 304 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 LALBAP00709 142 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 CD2P06729 351 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 GRPP07492 148 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 OCM2P0CE71 109 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 OCMP0CE72 109 aaPredicted RBP10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 HSMCR30P0CW71 290 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 LYNX1P0DP58 116 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 IRF2P14316 349 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 MAB21L1Q13394 359 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 KCTD21Q4G0X4 260 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 YIF1BQ5BJH7 314 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 PLCXD3Q63HM9 321 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 KCTD8Q6ZWB6 473 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 PEG10Q86TG7 708 aaKnown RBP10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 SPARTQ8N0X7 666 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 MS4A15Q8N5U1 240 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 ZNF525Q8N782 197 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 ZFP41Q8N8Y5 198 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 OR5D14Q8NGL3 314 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 OR11L1Q8NGX0 322 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 RPS4Y2Q8TD47 263 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 TSEN15Q8WW01 171 aaKnown RBP10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 HPS1Q92902 700 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 TIMD4Q96H15 378 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 TECTBQ96PL2 329 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 OR5M11Q96RB7 305 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 CHODLQ9H9P2 273 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 FN3KRPQ9HA64 309 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 LSM2Q9Y333 95 aaKnown RBP10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 USF3Q68DE3 2245 aa10.09□□□□□ -0.79
SPTLC1-202ENST00000337841 ITPR2Q14571 2701 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 POLQO75417 2590 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 HRNRQ86YZ3 2850 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 ANKRD61A6NGH8 418 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 A6NIN4 97 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 OR5B21A6NL26 309 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 TMEM210A6NLX4 147 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 TNFAIP8O95379 198 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 SLC25A16P16260 332 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 GATA4P43694 442 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 GNG3P63215 75 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 EMX1Q04741 257 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 TBCEQ15813 527 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 TMEM42Q69YG0 159 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 ZNF773Q6PK81 442 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 ZNF367Q7RTV3 350 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 MOGAT3Q86VF5 341 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 SERPINA12Q8IW75 414 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 OR10AC1Q8NH08 325 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 C10orf105Q8TEF2 133 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 THRSPQ92748 146 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 UFD1Q92890 307 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 RAB1CQ92928 201 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 YIPF5Q969M3 257 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 ITPKCQ96DU7 683 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 Q96MF0 132 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 MGLLQ99685 303 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 PIMREGQ9BSJ6 248 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 GCM1Q9NP62 436 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 ACOT13Q9NPJ3 140 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 GPR173Q9NS66 373 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 TREM2Q9NZC2 230 aa10.08□□□□□ -0.8
SPTLC1-202ENST00000337841 A0A087WXM4 84 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 IGHV3-64DA0A0J9YX35 117 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 LOC100289279A0A1B0GTE1 492 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 PNMA8CA0A1B0GUJ8 204 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 A6NLC8 198 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 ZNF732B4DXR9 585 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 CLDN25C9JDP6 229 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 PPIHO43447 177 aaKnown RBP10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 LMX1BO60663 402 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 PTBP3O95758 552 aaKnown RBP10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 PRKACBP22694 351 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 GIFP27352 417 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 GPR6P46095 362 aaPredicted RBP10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 SOX2P48431 317 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 FUT6P51993 359 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 MLLT11Q13015 90 aaPredicted RBP10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 TPBGQ13641 420 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 CNN3Q15417 329 aaKnown RBP10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 SPRNQ5BIV9 151 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 CEP78Q5JTW2 689 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 PRAMEF6Q5VXH4 476 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 DNM1P46Q6ZS02 220 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 UTS2BQ765I0 119 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 C1orf87Q8N0U7 546 aa10.07□□□□□ -0.8
SPTLC1-202ENST00000337841 OR1M1Q8NGA1 313 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms