RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 CST2P09228 141 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 CRYGSP22914 178 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 MPZP25189 248 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 HRH1P35367 487 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 UBE2V2Q15819 145 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 SNAI3Q3KNW1 292 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 PLAC9Q5JTB6 97 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 DCAF12L2Q5VW00 463 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 JMJD6Q6NYC1 403 aaPredicted RBP15.24■□□□□ 0.03
DDX28-201ENST00000332395 C11orf88Q6PI97 169 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 CRIP3Q6Q6R5 217 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 C3P1Q6ZMU1 363 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 CPT1CQ8TCG5 803 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 PP6455Q8WZ26 134 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 ELMOD3Q96FG2 381 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 SHARPINQ9H0F6 387 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 PIGLQ9Y2B2 252 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 PLEKHA6Q9Y2H5 1048 aa15.24■□□□□ 0.03
DDX28-201ENST00000332395 TOR1AO14656 332 aa15.23■□□□□ 0.03
DDX28-201ENST00000332395 MTRF1O75570 445 aaKnown RBP15.23■□□□□ 0.03
DDX28-201ENST00000332395 NEURL1O76050 574 aa15.23■□□□□ 0.03
DDX28-201ENST00000332395 GSTP1P09211 210 aaKnown RBP15.23■□□□□ 0.03
DDX28-201ENST00000332395 HIST1H1DP16402 221 aaKnown RBP15.23■□□□□ 0.03
DDX28-201ENST00000332395 BTN1A1Q13410 526 aa15.23■□□□□ 0.03
DDX28-201ENST00000332395 ZMYND11Q15326 602 aa15.23■□□□□ 0.03
DDX28-201ENST00000332395 MPPED2Q15777 294 aa15.23■□□□□ 0.03
DDX28-201ENST00000332395 RSPO4Q2I0M5 234 aaPredicted RBP15.23■□□□□ 0.03
DDX28-201ENST00000332395 OR5D18Q8NGL1 313 aa15.23■□□□□ 0.03
DDX28-201ENST00000332395 ST8SIA4Q92187 359 aa15.23■□□□□ 0.03
DDX28-201ENST00000332395 OR10A2Q9H208 303 aa15.23■□□□□ 0.03
DDX28-201ENST00000332395 VSIG4Q9Y279 399 aa15.23■□□□□ 0.03
DDX28-201ENST00000332395 TERTO14746 1132 aaKnown RBP15.22■□□□□ 0.03
DDX28-201ENST00000332395 SYNGR3O43761 229 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 MT-CO3P00414 261 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 B4GALT1P15291 398 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 CXCL2P19875 107 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 NFYAP23511 347 aaPredicted RBP15.22■□□□□ 0.03
DDX28-201ENST00000332395 NUP62P37198 522 aaPredicted RBP15.22■□□□□ 0.03
DDX28-201ENST00000332395 PTGFRP43088 359 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 FAM189A2Q15884 450 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 ABHD17BQ5VST6 288 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 C17orf107Q6ZR85 190 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 C12orf45Q8N5I9 185 aaPredicted RBP15.22■□□□□ 0.03
DDX28-201ENST00000332395 OR56B1Q8NGI3 324 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 OR52H1Q8NGJ2 320 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 CPNE4Q96A23 557 aaPredicted RBP15.22■□□□□ 0.03
DDX28-201ENST00000332395 ZNF845Q96IR2 970 aaPredicted RBP15.22■□□□□ 0.03
DDX28-201ENST00000332395 SIGLEC12Q96PQ1 595 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 URM1Q9BTM9 101 aaKnown RBP15.22■□□□□ 0.03
DDX28-201ENST00000332395 C1QTNF6Q9BXI9 259 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 CST11Q9H112 138 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 R4GN57 208 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 RTTNQ86VV8 2226 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 RGS11O94810 467 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 TMEM50BP56557 158 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 SCRN3Q0VDG4 424 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 DHRS2Q13268 280 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 TUSC1Q2TAM9 212 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 SFRP5Q5T4F7 317 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 RGS7BPQ6MZT1 257 aaPredicted RBP15.22■□□□□ 0.03
DDX28-201ENST00000332395 ZNF774Q6NX45 483 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 DRAM2Q6UX65 266 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 OVCH2Q7RTZ1 564 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 C1QL2Q7Z5L3 287 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 CCDC54Q8NEL0 328 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 OR2M7Q8NG81 312 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 ABHD3Q8WU67 409 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 MRGPRFQ96AM1 343 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 SGK3Q96BR1 496 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 C10orf35Q96D05 121 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 FAM173AQ9BQD7 235 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 GHRLQ9UBU3 117 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 PCDHGA1Q9Y5H4 931 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 SESN1Q9Y6P5 492 aa15.22■□□□□ 0.03
DDX28-201ENST00000332395 AHCTF1Q8WYP5 2266 aa15.21■□□□□ 0.03
DDX28-201ENST00000332395 LOC100509620A0A075B734 347 aa15.21■□□□□ 0.03
DDX28-201ENST00000332395 STMND1H3BQB6 276 aa15.21■□□□□ 0.03
DDX28-201ENST00000332395 CYTIPO60759 359 aa15.21■□□□□ 0.03
DDX28-201ENST00000332395 TBPP20226 339 aa15.21■□□□□ 0.03
DDX28-201ENST00000332395 ALDH3B1P43353 468 aa15.21■□□□□ 0.03
DDX28-201ENST00000332395 OR1F12Q8NHA8 337 aa15.21■□□□□ 0.03
DDX28-201ENST00000332395 FOXB1Q99853 325 aa15.21■□□□□ 0.03
DDX28-201ENST00000332395 L7N2F9 121 aa15.21■□□□□ 0.02
DDX28-201ENST00000332395 NAT2P11245 290 aa15.21■□□□□ 0.02
DDX28-201ENST00000332395 ZNF32P17041 273 aa15.21■□□□□ 0.02
DDX28-201ENST00000332395 RFC3P40938 356 aa15.21■□□□□ 0.02
DDX28-201ENST00000332395 RPS27AP62979 156 aaKnown RBP15.21■□□□□ 0.02
DDX28-201ENST00000332395 CEACAM16Q2WEN9 425 aa15.21■□□□□ 0.02
DDX28-201ENST00000332395 DCAF10Q5QP82 559 aa15.21■□□□□ 0.02
DDX28-201ENST00000332395 RIPPLY2Q5TAB7 128 aa15.21■□□□□ 0.02
DDX28-201ENST00000332395 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.21■□□□□ 0.02
DDX28-201ENST00000332395 ARHGAP5-AS1Q96IT6 56 aa15.21■□□□□ 0.02
DDX28-201ENST00000332395 ZNF703Q9H7S9 590 aaPredicted RBP15.21■□□□□ 0.02
DDX28-201ENST00000332395 OR6C65A6NJZ3 312 aa15.2■□□□□ 0.02
DDX28-201ENST00000332395 MCRIP1C9JLW8 97 aa15.2■□□□□ 0.02
DDX28-201ENST00000332395 MFNGO00587 321 aa15.2■□□□□ 0.02
DDX28-201ENST00000332395 RAD51DO75771 328 aa15.2■□□□□ 0.02
DDX28-201ENST00000332395 SNAPC5O75971 98 aa15.2■□□□□ 0.02
DDX28-201ENST00000332395 PATE4P0C8F1 98 aa15.2■□□□□ 0.02
DDX28-201ENST00000332395 FCGR2AP12318 317 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms