RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 TM4SF18Q96CE8 201 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 ZIC5Q96T25 663 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 FIGNL2A6NMB9 653 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 FCGR3BO75015 233 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 ACP1P24666 158 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 RTP5Q14D33 572 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 TRAT1Q6PIZ9 186 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 ESPL1Q14674 2120 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 TRDV1A0A1B0GX56 115 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 GPR87Q9BY21 358 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 ZNF385DQ9H6B1 395 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 TRAV39A0A0B4J263 110 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 A0A1W2PR80 420 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 ACTL6AO96019 429 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 SDHAP31040 664 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 DOLPP1Q86YN1 238 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 SLC26A10Q8NG04 563 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 OR5R1Q8NH85 324 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 ATG101Q9BSB4 218 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 SLC46A2Q9BY10 475 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 FZD6O60353 706 aa14.83□□□□□ -0.03
PTCH1-201ENST00000331920 SEMA7AO75326 666 aa14.83□□□□□ -0.03
PTCH1-201ENST00000331920 TNFSF15O95150 251 aa14.83□□□□□ -0.03
PTCH1-201ENST00000331920 NOVA1P51513 510 aaKnown RBP14.83□□□□□ -0.03
PTCH1-201ENST00000331920 ADPRHP54922 357 aa14.83□□□□□ -0.03
PTCH1-201ENST00000331920 GABRA6Q16445 453 aa14.83□□□□□ -0.03
PTCH1-201ENST00000331920 LRRC26Q2I0M4 334 aa14.83□□□□□ -0.03
PTCH1-201ENST00000331920 KLF16Q9BXK1 252 aaPredicted RBP14.83□□□□□ -0.03
PTCH1-201ENST00000331920 OR2D2Q9H210 308 aa14.83□□□□□ -0.03
PTCH1-201ENST00000331920 TCFL5Q9UL49 500 aa14.83□□□□□ -0.03
PTCH1-201ENST00000331920 ZNF83P51522 516 aa14.83□□□□□ -0.03
PTCH1-201ENST00000331920 MRPS21P82921 87 aaKnown RBP14.83□□□□□ -0.03
PTCH1-201ENST00000331920 DHODHQ02127 395 aa14.83□□□□□ -0.03
PTCH1-201ENST00000331920 SP6Q3SY56 376 aa14.83□□□□□ -0.03
PTCH1-201ENST00000331920 RPS19BP1Q86WX3 136 aaKnown RBP14.83□□□□□ -0.03
PTCH1-201ENST00000331920 OSR2Q8N2R0 312 aa14.83□□□□□ -0.03
PTCH1-201ENST00000331920 OR1L1Q8NH94 360 aa14.83□□□□□ -0.03
PTCH1-201ENST00000331920 PELI1Q96FA3 418 aa14.83□□□□□ -0.03
PTCH1-201ENST00000331920 UBQLN3Q9H347 655 aa14.83□□□□□ -0.03
PTCH1-201ENST00000331920 KNL1Q8NG31 2342 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 IGKV3D-11A0A0A0MRZ8 115 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 K7ESF4 209 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 AP4M1O00189 453 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 IGKV3-11P04433 115 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 COMPP49747 757 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-201ENST00000331920 LIM2P55344 173 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 TCL1AP56279 114 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 FOXC1Q12948 553 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 C6orf201Q7Z4U5 140 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 LOC107984156A0A0G2JMH3 177 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 ZNF737O75373 536 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 RAF1P04049 648 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 ARL17AQ8IVW1 177 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 PACRGQ96M98 296 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-201ENST00000331920 TIMP4Q99727 224 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 TXLNGYQ9BZA5 131 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 SLC22A20A6NK97 555 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 WDR73Q6P4I2 378 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 WDR88Q6ZMY6 472 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 NAA60Q9H7X0 242 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 IGKV6D-41A0A0C4DH26 115 aa14.83□□□□□ -0.04
PTCH1-201ENST00000331920 PTCRAQ6ISU1 281 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-201ENST00000331920 PLAUP00749 431 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 NMUP48645 174 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 PRSS8Q16651 343 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 CBARPQ8N350 705 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-201ENST00000331920 ZNF502Q8TBZ5 544 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 ZCCHC14Q8WYQ9 949 aaKnown RBP14.82□□□□□ -0.04
PTCH1-201ENST00000331920 PBOV1Q9GZY1 135 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 BCL9LQ86UU0 1499 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 PCYT2Q99447 389 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 HAPLN2Q9GZV7 340 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 TNFRSF10CO14798 259 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 FAM78BQ5VT40 261 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 SPRED1Q7Z699 444 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 KCNE4Q8WWG9 221 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 FAM210BQ96KR6 192 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 C2orf50Q96LR7 162 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 ICOSLGO75144 302 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 T-ENOLP0DO92 83 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 RPS27P42677 84 aaKnown RBP14.82□□□□□ -0.04
PTCH1-201ENST00000331920 LGALS7P47929 136 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 SLC16A11Q8NCK7 471 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 DHRS7CA6NNS2 312 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 SLCO2B1O94956 709 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 CD3DP04234 171 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 ARRB2P32121 409 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 TTC32Q5I0X7 151 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 SPAG8Q99932 426 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-201ENST00000331920 KLF7O75840 302 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-201ENST00000331920 CSF2RBP32927 897 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 YPEL5P62699 121 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 C19orf54Q5BKX5 351 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 RGS13O14921 159 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 CST5P28325 142 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-201ENST00000331920 KIR2DL1P43626 348 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-201ENST00000331920 KIR2DL2P43627 348 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-201ENST00000331920 CACNG7P62955 275 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 RFLNAQ6ZTI6 216 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 EAF1Q96JC9 268 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms